RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 SPRR3Q9UBC9 169 aa7.83□□□□□ -1.16
PHGDH-219ENST00000641513 CLEC4AQ9UMR7 237 aa7.83□□□□□ -1.16
PHGDH-219ENST00000641513 ZNF281Q9Y2X9 895 aa7.83□□□□□ -1.16
PHGDH-219ENST00000641513 NOSIPQ9Y314 301 aaKnown RBP7.83□□□□□ -1.16
PHGDH-219ENST00000641513 LRP12Q9Y561 859 aa7.83□□□□□ -1.16
PHGDH-219ENST00000641513 ALG5Q9Y673 324 aa7.83□□□□□ -1.16
PHGDH-219ENST00000641513 CACNG2Q9Y698 323 aa7.83□□□□□ -1.16
PHGDH-219ENST00000641513 DOCK7Q96N67 2140 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 A0A1W2PPK0 400 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 H3BSH0 61 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 GPR171O14626 319 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 DVL2O14641 736 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 DHHO43323 396 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 MRPL33O75394 65 aaKnown RBP7.82□□□□□ -1.16
PHGDH-219ENST00000641513 UPK3AO75631 287 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 ABHD16AO95870 558 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 ECDO95905 644 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-219ENST00000641513 WNT11O96014 354 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 ATF1P18846 271 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 AP3S2P59780 193 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 NANOS3P60323 173 aaKnown RBP7.82□□□□□ -1.16
PHGDH-219ENST00000641513 FAPQ12884 760 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 IKZF1Q13422 519 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 GPR176Q14439 515 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 CARTPTQ16568 116 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 HIST3H3Q16695 136 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 TEX30Q5JUR7 227 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 ELFN2Q5R3F8 820 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 CD276Q5ZPR3 534 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 ZNF57Q68EA5 555 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-219ENST00000641513 LRRC18Q8N456 261 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 OR2G2Q8NGZ5 317 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 LILRB4Q8NHJ6 448 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 FNDC9Q8TBE3 224 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 SMIM4Q8WVI0 70 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 CAPSLQ8WWF8 208 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 RAB40AQ8WXH6 277 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 HSD17B8Q92506 261 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 YIPF5Q969M3 257 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 SLAMF6Q96DU3 332 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 WDYHV1Q96HA8 205 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 HYLS1Q96M11 299 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 ABCG5Q9H222 651 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 PPIL3Q9H2H8 161 aaKnown RBP7.82□□□□□ -1.16
PHGDH-219ENST00000641513 ZDHHC11Q9H8X9 412 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 BRD7Q9NPI1 651 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 NUFIP1Q9UHK0 495 aaKnown RBP7.82□□□□□ -1.16
PHGDH-219ENST00000641513 GDF2Q9UK05 429 aaPredicted RBP7.82□□□□□ -1.16
PHGDH-219ENST00000641513 RCE1Q9Y256 329 aa7.82□□□□□ -1.16
PHGDH-219ENST00000641513 PCDHGA9Q9Y5G4 932 aaKnown RBP7.82□□□□□ -1.16
PHGDH-219ENST00000641513 TRBV5-5A0A0J9YX44 114 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 A0A1B0GVI7 797 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 SLC22A20A6NK97 555 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 DOK2O60496 412 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 PRAF2O60831 178 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ZNF254O75437 659 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 IGHV3-9P01782 118 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 MSR1P21757 451 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 HSD11B1P28845 292 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 BTCP35070 178 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 SOX2P48431 317 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 CCR9P51686 369 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ROM1Q03395 351 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 RNPS1Q15287 305 aaKnown RBP7.81□□□□□ -1.16
PHGDH-219ENST00000641513 SF3B4Q15427 424 aaKnown RBP eCLIP7.81□□□□□ -1.163e-16■■■■■ 41.5
PHGDH-219ENST00000641513 SLC36A2Q495M3 483 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 C10orf128Q5T292 105 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 FAM27D1Q5T7N8 215 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ZNF782Q6ZMW2 699 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-219ENST00000641513 CFAP77Q6ZQR2 320 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ZNF767PQ75MW2 155 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 FGD2Q7Z6J4 655 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 TUSC5Q8IXB3 177 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ZNF100Q8IYN0 542 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 UBE2J2Q8N2K1 259 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ST7LQ8TDW4 575 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 RNF128Q8TEB7 428 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 TSEN15Q8WW01 171 aaKnown RBP7.81□□□□□ -1.16
PHGDH-219ENST00000641513 TMEM45BQ96B21 275 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 C4orf45Q96LM5 186 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 DERL3Q96Q80 235 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ALKBH3Q96Q83 286 aaPredicted RBP7.81□□□□□ -1.16
PHGDH-219ENST00000641513 OR14A2Q96R54 314 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ZNF416Q9BWM5 594 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 HDHD2Q9H0R4 259 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 SLITRK2Q9H156 845 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 NELFAQ9H3P2 528 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 CRLF2Q9HC73 371 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 DIABLOQ9NR28 239 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 PARPBPQ9NWS1 579 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 FRRS1LQ9P0K9 344 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 LUZP4Q9P127 313 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 NLKQ9UBE8 527 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 ASH2LQ9UBL3 628 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 UPB1Q9UBR1 384 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 CYB5R1Q9UHQ9 305 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 FBXL3Q9UKT7 428 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 WASF3Q9UPY6 502 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 EMC9Q9Y3B6 208 aa7.81□□□□□ -1.16
PHGDH-219ENST00000641513 LHFPL6Q9Y693 200 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms