RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ZNF629Q9UEG4 869 aaPredicted RBP9.75□□□□□ -0.85
SNIP1-204ENST00000638725 SHPKQ9UHJ6 478 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 RAB22AQ9UL26 194 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 MKL2Q9ULH7 1088 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 CPAMD8Q8IZJ3 1885 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 TRANK1O15050 2925 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 DXOO77932 396 aaKnown RBP9.75□□□□□ -0.85
SNIP1-204ENST00000638725 MT-ATP6P00846 226 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 PMP2P02689 132 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 RAB6AP20340 208 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 PVALBP20472 110 aaPredicted RBP9.75□□□□□ -0.85
SNIP1-204ENST00000638725 PSMB6P28072 239 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 CTHP32929 405 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 NR0B1P51843 470 aaKnown RBP9.75□□□□□ -0.85
SNIP1-204ENST00000638725 C1orf140Q5VVS0 124 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 WDFY1Q8IWB7 410 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 NKAIN3Q8N8D7 197 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 OR52N4Q8NGI2 321 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 MARCH1Q8TCQ1 289 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 ELP5Q8TE02 316 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 TMED6Q8WW62 240 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 ROBO4Q8WZ75 1007 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 FGGYQ96C11 551 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 RRNAD1Q96FB5 475 aaKnown RBP9.75□□□□□ -0.85
SNIP1-204ENST00000638725 TLNRD1Q9H1K6 362 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 LANCL2Q9NS86 450 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 CENPMQ9NSP4 180 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 F8VVB4 439 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 F8VWA3 439 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 PLPP3O14495 311 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 VSIG8P0DPA2 414 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 TPT1P13693 172 aaKnown RBP9.75□□□□□ -0.85
SNIP1-204ENST00000638725 PGCP20142 388 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 GALNSP34059 522 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 GNALP38405 381 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 RABIFP47224 123 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 EIF1AXP47813 144 aaKnown RBP9.75□□□□□ -0.85
SNIP1-204ENST00000638725 PNLIPRP2P54317 469 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 H3F3CQ6NXT2 135 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 OR4A4PQ8NGN8 299 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 STOML3Q8TAV4 291 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 OIT3Q8WWZ8 545 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 TBL1XR1Q9BZK7 514 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 PTGES2Q9H7Z7 377 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 SOHLH2Q9NX45 425 aa9.75□□□□□ -0.85
SNIP1-204ENST00000638725 IGKV1D-43A0A0B4J1Z2 117 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 SOX1O00570 391 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 NPIPB7O75200 414 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 MTRF1O75570 445 aaKnown RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 DUS4LO95620 317 aaKnown RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 IFNA6P05013 189 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ISG15P05161 165 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ZNF823P16415 610 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 MPZP25189 248 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 CRABP1P29762 137 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 OR1D4P47884 311 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 NPBWR1P48145 328 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 GABRA4P48169 554 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 FZD2Q14332 565 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 RAB11FIP2Q7L804 512 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 BAP18Q8IXM2 172 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ZSCAN4Q8NAM6 433 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 SLC26A10Q8NG04 563 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 OR2I1PQ8NGU4 316 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ST7LQ8TDW4 575 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ZNF721Q8TF20 911 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ARL11Q969Q4 196 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 TCTN2Q96GX1 697 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 CYYR1Q96J86 154 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 RNF126Q9BV68 326 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ESRP2Q9H6T0 727 aaKnown RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 CYTL1Q9NRR1 136 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 HS3ST3A1Q9Y663 406 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 TMEM131Q92545 1883 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 TEX13DA0A0J9YY54 714 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 TCRBV21S2A2A0A5A6 115 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 DBX1A6NMT0 343 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 H0YIZ8 118 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 SSX5O60225 188 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 SEMA4FO95754 770 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 DDAH2O95865 285 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 IGKV3-11P04433 115 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 CD79AP11912 226 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 GFERP55789 205 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 AIMP2Q13155 320 aaKnown RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 NKAPLQ5M9Q1 402 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 TMEM244Q5VVB8 128 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 PTCRAQ6ISU1 281 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 FAHD2BQ6P2I3 314 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ZNF704Q6ZNC4 412 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 RNF144BQ7Z419 303 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 FAM219AQ8IW50 185 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 BHLHE23Q8NDY6 225 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 ADAT3Q96EY9 351 aaPredicted RBP9.74□□□□□ -0.85
SNIP1-204ENST00000638725 FAHD2AQ96GK7 314 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 TREM1Q9NP99 234 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 PRR13Q9NZ81 148 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 SLCO1B1Q9Y6L6 691 aa9.74□□□□□ -0.85
SNIP1-204ENST00000638725 SPTY2D1-AS1A0A0U1RR47 76 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms