RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	CIB4	A0PJX0	185 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	ZNF879	B4DU55	563 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823		E9PLN8	166 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823		F5H5K5	113 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	IL1A	P01583	271 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	ISG15	P05161	165 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	UBC	P0CG48	685 aa	Known RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	COX5B	P10606	129 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	CD79A	P11912	226 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	ZNF182	P17025	639 aa	Predicted RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	COX5A	P20674	150 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	CX3CR1	P49238	355 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	TPTE	P56180	551 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	ZNF121	P58317	390 aa	Predicted RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	GALK2	Q01415	458 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	GABRA6	Q16445	453 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	DGUOK	Q16854	277 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	KRTAP27-1	Q3LI81	207 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	TBRG1	Q3YBR2	411 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	ZMAT1	Q5H9K5	638 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	PABPC1L2A	Q5JQF8	200 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	DRAM2	Q6UX65	266 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	ELMOD2	Q8IZ81	293 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	GABRG1	Q8N1C3	465 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	NAXE	Q8NCW5	288 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	C1orf162	Q8NEQ5	155 aa	Predicted RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	AKR7L	Q8NHP1	331 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	GPR148	Q8TDV2	347 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	NANOS1	Q8WY41	292 aa	Known RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	RGP1	Q92546	391 aa	Predicted RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	PPP1R14A	Q96A00	147 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	DCLRE1C	Q96SD1	692 aa	Known RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	VKORC1	Q9BQB6	163 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	DCUN1D5	Q9BTE7	237 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	OPN3	Q9H1Y3	402 aa	Predicted RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	SP140L	Q9H930	580 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	SLC17A5	Q9NRA2	495 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	B3GNT2	Q9NY97	397 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	NUFIP1	Q9UHK0	495 aa	Known RBP	10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	TINAG	Q9UJW2	476 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	MYO7B	Q6PIF6	2116 aa		10.28	□□□□□ -0.76
CLN6-223	ENST00000637823	NBEA	Q8NFP9	2946 aa		10.27	□□□□□ -0.76
CLN6-223	ENST00000637823	SPTA1	P02549	2419 aa		10.27	□□□□□ -0.76
CLN6-223	ENST00000637823	TRAV1-2	A0A0B4J238	106 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823		A0A0G2JNJ9	132 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823		M0R135	149 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	MSTN	O14793	375 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	ARL6IP5	O75915	188 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	HLA-H	P01893	362 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	RAF1	P04049	648 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	UCHL1	P09936	223 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	ACHE	P22303	614 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	CRYGS	P22914	178 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	MAPK3	P27361	379 aa	Predicted RBP	10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	RPS19	P39019	145 aa	Known RBP	10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	HTR5A	P47898	357 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	RAB1A	P62820	205 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	PLP2	Q04941	152 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	INSL4	Q14641	139 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823		Q499Y3	187 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	HIKESHI	Q53FT3	197 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	PRSS45	Q7RTY3	260 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	TPRA1	Q86W33	373 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	RDH10	Q8IZV5	341 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	OR13C5	Q8NGS8	318 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	ZNF799	Q96GE5	643 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	BRD7	Q9NPI1	651 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	ZNF629	Q9UEG4	869 aa	Predicted RBP	10.27	□□□□□ -0.77
CLN6-223	ENST00000637823		Q9UFV3	132 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	HHLA2	Q9UM44	414 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823	ATRX	P46100	2492 aa		10.27	□□□□□ -0.77
CLN6-223	ENST00000637823		A0A0U1RQV5	110 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	IQCM	A0A1B0GVH7	501 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	LYZL6	O75951	148 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	CDRT1	O95170	752 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	TTR	P02766	147 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	ANXA2	P07355	339 aa	Known RBP	10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	ACSM4	P0C7M7	580 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	OCM2	P0CE71	109 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	MYL9	P24844	172 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	CALR	P27797	417 aa	Known RBP	10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	SDC2	P34741	201 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	SOX6	P35712	828 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	CA7	P43166	264 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	MTNR1B	P49286	362 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	UBE2N	P61088	152 aa	Known RBP	10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	GSG1	Q2KHT4	349 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	ODF4	Q2M2E3	257 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	SFRP5	Q5T4F7	317 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	FAM57B	Q71RH2	274 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	NAA40	Q86UY6	237 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	CXorf67	Q86X51	503 aa	Predicted RBP	10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	CPEB3	Q8NE35	698 aa	Known RBP	10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	OR8B12	Q8NGG6	310 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	OR52H1	Q8NGJ2	320 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	SLC7A6	Q92536	515 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	PGAM5	Q96HS1	289 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	DACH2	Q96NX9	599 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	DERL3	Q96Q80	235 aa		10.26	□□□□□ -0.77
CLN6-223	ENST00000637823	OR14A2	Q96R54	314 aa		10.26	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms