RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 SRMP19623 302 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 RAB15P59190 212 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 CORO2AQ92828 525 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 RPEQ96AT9 228 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 MS4A4AQ96JQ5 239 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 ZPBPQ9BS86 351 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 EXOSC3Q9NQT5 275 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 SLC25A4P12235 298 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 OR51S1Q8NGJ8 323 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF583Q96ND8 569 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 SLCO5A1Q9H2Y9 848 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 PRRT4C9JH25 899 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 MGPP08493 103 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 ST6GAL1P15907 406 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 NAGAP17050 411 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 DAPP51397 102 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 MDGA2Q7Z553 956 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 ZDHHC23Q8IYP9 409 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 ELSPBP1Q96BH3 223 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 TIMM10BQ9Y5J6 103 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 MED19A0JLT2 244 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 OR6C68A6NDL8 312 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 EMX1Q04741 257 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 CSF3RQ99062 836 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 CLN3Q13286 438 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 RBMS2Q15434 407 aaKnown RBP16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 HDAC8Q9BY41 377 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 TAAR3PQ9P1P4 343 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 FMN2Q9NZ56 1722 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 TRGV5A0A0B4J1U4 118 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 LRIT2A6NDA9 550 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 K7EQS6 105 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 HFEQ30201 348 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 PXDC1Q5TGL8 231 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF691Q5VV52 312 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 TFAP2EQ6VUC0 442 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 SIAH3Q8IW03 269 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 GPR84Q9NQS5 396 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 TRIM23P36406 574 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF260Q3ZCT1 412 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 BTNL8Q6UX41 500 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 DTD1Q8TEA8 209 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 ITPKCQ96DU7 683 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 C20orf85Q9H1P6 137 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 LOC100289279A0A1B0GTE1 492 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 SMAD4Q13485 552 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 PLPP6Q8IY26 295 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 RFESDQ8TAC1 157 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 C14orf79Q96F83 325 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 NIPSNAP1Q9BPW8 284 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 DNAJC25-GNG10A0A024R161 153 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 KRTDAPP60985 99 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 CSNK1G2P78368 415 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 TMEM240Q5SV17 173 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 RPL3LQ92901 407 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 ADAT1Q9BUB4 502 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 CSAG2Q9Y5P2 127 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 SFXN4Q6P4A7 337 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 NKAIN4Q8IVV8 208 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 MKS1Q9NXB0 559 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 PSENENQ9NZ42 101 aa16.21■□□□□ 0.19
CACNA1A-227ENST00000636549 MYH9P35579 1960 aaKnown RBP16.21■□□□□ 0.18
CACNA1A-227ENST00000636549 ADRA2CP18825 462 aa16.21■□□□□ 0.18
CACNA1A-227ENST00000636549 RPL27P61353 136 aaKnown RBP16.21■□□□□ 0.18
CACNA1A-227ENST00000636549 REEP5Q00765 189 aa16.21■□□□□ 0.18
CACNA1A-227ENST00000636549 OR2M3Q8NG83 312 aa16.21■□□□□ 0.18
CACNA1A-227ENST00000636549 THAP10Q9P2Z0 257 aaPredicted RBP16.21■□□□□ 0.18
CACNA1A-227ENST00000636549 PHRF1Q9P1Y6 1649 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 ALDOCP09972 364 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 TOR2AQ5JU69 321 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 LRRC28Q86X40 367 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 ACSS1Q9NUB1 689 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 FLVCR1Q9Y5Y0 555 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 NFAT5O94916 1531 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 KEAP1Q14145 624 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 PRDM4Q9UKN5 801 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 A4GNTQ9UNA3 340 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 NKX2-1P43699 371 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 M1APQ8TC57 530 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 YIPF5Q969M3 257 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 TRBV23-1A0A0A0MS06 115 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 ARPC4-TTLL3A0A0A6YYG9 625 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 SPRED1Q7Z699 444 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 GNRHR2Q96P88 292 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 ZMAT5Q9UDW3 170 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 FAM208AQ9UK61 1670 aaKnown RBP16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 CBR3O75828 277 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 FURINP09958 794 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 SPINK14Q6IE38 97 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 FAHD2BQ6P2I3 314 aaPredicted RBP16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 LGI3Q8N145 548 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 KCNRGQ8N5I3 272 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 FAHD2AQ96GK7 314 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 MRGPRX1Q96LB2 322 aa16.2■□□□□ 0.18
CACNA1A-227ENST00000636549 TRGV10A0A0A0MS01 117 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 LYG1Q8N1E2 194 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 UBE2FQ969M7 185 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 OR51I2Q9H344 312 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 BCO1Q9HAY6 547 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms