RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SCN1BQ07699 218 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 FAPQ12884 760 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ASAH1Q13510 395 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 DAZAP2Q15038 168 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ALG10Q5BKT4 473 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 NHLRC1Q6VVB1 395 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 BHLHA15Q7RTS1 189 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 SSX8Q7RTT4 187 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 NR2C2APQ86WQ0 139 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 RFLNBQ8N5W9 214 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 IL17RDQ8NFM7 739 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 RPS4Y2Q8TD47 263 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 GHSRQ92847 366 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 KCTD12Q96CX2 325 aaKnown RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 RASD2Q96D21 266 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 PELI1Q96FA3 418 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 MRPL48Q96GC5 212 aaKnown RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 Q96M85 177 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ADAD1Q96M93 576 aaKnown RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 WFIKKN1Q96NZ8 548 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ACTR6Q9GZN1 396 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 SLC7A10Q9NS82 523 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 COMMD3Q9UBI1 195 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 MOKQ9UQ07 419 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ITPR2Q14571 2701 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 TRAV1-2A0A0B4J238 106 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 A0A1W2PQ09 198 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 A0A1W2PRG6 482 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ZNF587BE7ETH6 402 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 HPGDSO60760 199 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 SERPINA3P01011 423 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 IGHV3-9P01782 118 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 HLA-DQB1P01920 261 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 PYCR1P32322 319 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 GBX2P52951 348 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 HCCSP53701 268 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 CTXN1P60606 82 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 RPL18Q07020 188 aaKnown RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 SLC3A1Q07837 685 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 CDK5R1Q15078 307 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ACSM3Q53FZ2 586 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ZNF684Q5T5D7 378 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 GPR139Q6DWJ6 353 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 OR7E24Q6IFN5 339 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 RPL22L1Q6P5R6 122 aaKnown RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 LEG1Q6P5S2 330 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 CNIH2Q6PI25 160 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 PAMR1Q6UXH9 720 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 SLC35D2Q76EJ3 337 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 HDDC2Q7Z4H3 204 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 CEACAM19Q7Z692 300 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ZNF295-AS1Q8N0V1 137 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ZNF433Q8N7K0 673 aaPredicted RBP7.74□□□□□ -1.17
SMAD4-217ENST00000611848 OR51L1Q8NGJ5 315 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 OR6X1Q8NH79 312 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 HSD17B8Q92506 261 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 SMIM19Q96E16 107 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 OCSTAMPQ9BR26 566 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 NDEL1Q9GZM8 345 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ZCCHC4Q9H5U6 513 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 CELSR2Q9HCU4 2923 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 INIPQ9NRY2 104 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 MED29Q9NX70 200 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 ADAM30Q9UKF2 790 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 GRIP1Q9Y3R0 1128 aa7.74□□□□□ -1.17
SMAD4-217ENST00000611848 A0A0G2JK05 382 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 CIB4A0PJX0 185 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 FAM221AA4D161 298 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 NPIPB13A6NJU9 1138 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 A6NNC1 897 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 CENPBD1B2RD01 187 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 NPIPB4C9JG80 1138 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 RPL36A-HNRNPH2H7BZ11 118 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 SSX4O60224 188 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 SELENOFO60613 162 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 TMCC2O75069 709 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 UPK3AO75631 287 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 SERPINI2O75830 405 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 LYZL6O75951 148 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 ITGA5P08648 1049 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 IFNGR1P15260 489 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 CRYGSP22914 178 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 AZGP1P25311 298 aaKnown RBP7.73□□□□□ -1.17
SMAD4-217ENST00000611848 THBS2P35442 1172 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 ACVR1BP36896 505 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 NAA10P41227 235 aaPredicted RBP7.73□□□□□ -1.17
SMAD4-217ENST00000611848 BIDP55957 195 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 RPS11P62280 158 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMAD4-217ENST00000611848 TLE4Q04727 773 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 CD300CQ08708 224 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 TP53I3Q53FA7 332 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 PYDC2Q56P42 97 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 TIMM23BQ5SRD1 257 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 C1QTNF12Q5T7M4 302 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 UNQ9370/PRO34162Q6UXP9 181 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 SLC16A9Q7RTY1 509 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 NRARPQ7Z6K4 114 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 JAZF1Q86VZ6 243 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 C20orf196Q8IYI0 205 aa7.73□□□□□ -1.17
SMAD4-217ENST00000611848 TMEM123Q8N131 208 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms