RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 CLPXO76031 633 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 TSPAN15O95858 294 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 HLA-DPB1P04440 258 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 YAP1P46937 504 aaKnown RBP8.27□□□□□ -1.09
LIG1-209ENST00000596104 RAD23AP54725 363 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 HIST1H3AP68431 136 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 HOXA4Q00056 320 aaPredicted RBP8.27□□□□□ -1.09
LIG1-209ENST00000596104 TRAM2Q15035 370 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 PDCD1Q15116 288 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 KCNMB1Q16558 191 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 RSPO1Q2MKA7 263 aaPredicted RBP8.27□□□□□ -1.09
LIG1-209ENST00000596104 LRRC23Q53EV4 343 aaPredicted RBP8.27□□□□□ -1.09
LIG1-209ENST00000596104 HIST2H3PS2Q5TEC6 136 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 TMPRSS11FQ6ZWK6 438 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 HIST2H3AQ71DI3 136 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 GLB1L2Q8IW92 636 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 RNF113BQ8IZP6 322 aaKnown RBP8.27□□□□□ -1.09
LIG1-209ENST00000596104 BHLHE23Q8NDY6 225 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 C19orf18Q8NEA5 215 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 OR5L1Q8NGL2 311 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 ACOT11Q8WXI4 607 aaPredicted RBP8.27□□□□□ -1.09
LIG1-209ENST00000596104 DYRK2Q92630 601 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 ZNF570Q96NI8 536 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 PCGF1Q9BSM1 259 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 SYT4Q9H2B2 425 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 WDR76Q9H967 626 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 CTSZQ9UBR2 303 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 TMCC3Q9ULS5 477 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 COA3Q9Y2R0 106 aaPredicted RBP8.27□□□□□ -1.09
LIG1-209ENST00000596104 RNF114Q9Y508 228 aa8.27□□□□□ -1.09
LIG1-209ENST00000596104 SLC22A31A6NKX4 558 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 FAM220BPB1ANY3 271 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 ZNF879B4DU55 563 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 XKRYO14609 159 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 SLC16A7O60669 478 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 FAM20BO75063 409 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 KHDRBS3O75525 346 aaKnown RBP8.26□□□□□ -1.09
LIG1-209ENST00000596104 FPR3P25089 353 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 IFNA8P32881 189 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 RPL4P36578 427 aaKnown RBP8.26□□□□□ -1.09
LIG1-209ENST00000596104 CD200P41217 278 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 GPR4P46093 362 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 PRSS12P56730 875 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 SELENOWP63302 87 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 KRR1Q13601 381 aaKnown RBP8.26□□□□□ -1.09
LIG1-209ENST00000596104 MPPED2Q15777 294 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 TAF9Q16594 264 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 KRTAP27-1Q3LI81 207 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 ZBED5Q49AG3 693 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 TTMPQ5BVD1 217 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 COQ5Q5HYK3 327 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 METTL21CQ5VZV1 264 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 TBPL2Q6SJ96 375 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 MBOAT2Q6ZWT7 520 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 VTCN1Q7Z7D3 282 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 C1QL4Q86Z23 238 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 CELF2-AS1Q8N7Q2 184 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 ERGIC1Q969X5 290 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 TPD52L3Q96J77 140 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 COQ7Q99807 217 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 NUAK2Q9H093 628 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 HDHD2Q9H0R4 259 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 NMNAT1Q9HAN9 279 aaPredicted RBP8.26□□□□□ -1.09
LIG1-209ENST00000596104 SMURF1Q9HCE7 757 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 NRIP3Q9NQ35 241 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 ACOXLQ9NUZ1 547 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 TMEM100Q9NV29 134 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 VSX1Q9NZR4 365 aaPredicted RBP8.26□□□□□ -1.09
LIG1-209ENST00000596104 LHFPL6Q9Y693 200 aa8.26□□□□□ -1.09
LIG1-209ENST00000596104 IGHV1-69DA0A0B4J2H0 117 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 LGALS8O00214 317 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 DCTN6O00399 190 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 MRASO14807 208 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 FCN3O75636 299 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 TOX4O94842 621 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 NPPAP01160 153 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 IGHV1-69P01742 117 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 IGHV4-59P01825 116 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 IFNW1P05000 195 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 LIPFP07098 398 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 IRF2P14316 349 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 SDHAP31040 664 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 NPY4RP50391 375 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 GK2Q14410 553 aaPredicted RBP8.25□□□□□ -1.09
LIG1-209ENST00000596104 MEP1BQ16820 701 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 PRAMEF6Q5VXH4 476 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 GPR139Q6DWJ6 353 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 ZNF730Q6ZMV8 503 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 PTCHD4Q6ZW05 846 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 LDLRAD3Q86YD5 345 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 OR11L1Q8NGX0 322 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 TBC1D15Q8TC07 691 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 DYDC1Q8WWB3 177 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 GATAD2BQ8WXI9 593 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 UBE2FQ969M7 185 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 ATP6V1G3Q96LB4 118 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 WDFY2Q96P53 400 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 TECTBQ96PL2 329 aa8.25□□□□□ -1.09
LIG1-209ENST00000596104 GPX7Q96SL4 187 aaPredicted RBP8.25□□□□□ -1.09
LIG1-209ENST00000596104 FNDC11Q9BVV2 318 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms