RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-242	ENST00000593093	NAA11	Q9BSU3	229 aa	Predicted RBP	12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	LSM5	Q9Y4Y9	91 aa	Known RBP	12.83	□□□□□ -0.36
CIRBP-242	ENST00000593093	SCD	O00767	359 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	NME2P1	O60361	137 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF823	P16415	610 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	FBXW4	P57775	412 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	SMAD4	Q13485	552 aa	Known RBP	12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	RPL7L1	Q6DKI1	246 aa	Known RBP	12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	SLC18B1	Q6NT16	456 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	FAM180A	Q6UWF9	173 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	FAM24B	Q8N5W8	94 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	RRNAD1	Q96FB5	475 aa	Known RBP	12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	CYYR1	Q96J86	154 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	C8orf33	Q9H7E9	229 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	FN3KRP	Q9HA64	309 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093		A0A1W2PPE3	182 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	ARGFX	A6NJG6	315 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	NME1	P15531	152 aa	Known RBP	12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	EN2	P19622	333 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	GDI1	P31150	447 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	ARRB1	P49407	418 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	CLDN6	P56747	220 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	CD226	Q15762	336 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	CHRDL2	Q6WN34	429 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	MED25	Q71SY5	747 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	TMEM68	Q96MH6	324 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	TSPAN32	Q96QS1	320 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	TEX101	Q9BY14	249 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	PRSS38	A1L453	326 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	SLC33A1	O00400	549 aa	Predicted RBP	12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	ARPC3	O15145	178 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	IGHV2-70	P01814	119 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	ABCD3	P28288	659 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	IGFALS	P35858	605 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	PJVK	Q0ZLH3	352 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR4K15	Q8NH41	348 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	RAB7B	Q96AH8	199 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	PRO1933	Q9H354	126 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR5AC2	Q9NZP5	309 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	AMDHD2	Q9Y303	409 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	PCDHGA1	Q9Y5H4	931 aa		12.82	□□□□□ -0.36
CIRBP-242	ENST00000593093	MYO15A	Q9UKN7	3530 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093		A0A1B0GTQ1	180 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	TMEM269	A0A1B0GVZ9	245 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093		A0A1W2PPH5	198 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	FAM78A	Q5JUQ0	283 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	AWAT2	Q6E213	333 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	ARL6IP6	Q8N6S5	226 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	TMEM229B	Q8NBD8	167 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR4D6	Q8NGJ1	314 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR2I1P	Q8NGU4	316 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	C16orf52	Q8NHV5	167 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	POLE3	Q9NRF9	147 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	SMCO4	Q9NRQ5	59 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	COL4A6	Q14031	1691 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	TSFM	P43897	325 aa	Known RBP	12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	LBX1	P52954	281 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	NUBP1	P53384	320 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	GGTLC2	Q14390	218 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	SLC17A1	Q14916	467 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF74	Q16587	644 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	UQCC3	Q6UW78	93 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	ADGRE4P	Q86SQ3	457 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	MRPL43	Q8N983	215 aa	Known RBP	12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	ST7L	Q8TDW4	575 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	MMAB	Q96EY8	250 aa	Predicted RBP	12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	NRIP2	Q9BQI9	281 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	UTP23	Q9BRU9	249 aa	Known RBP	12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	TIMM29	Q9BSF4	260 aa		12.81	□□□□□ -0.36
CIRBP-242	ENST00000593093	C2orf72	A6NCS6	295 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	CXorf65	A6NEN9	183 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	TCAP	O15273	167 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	LILRB3	O75022	631 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	ABO	P16442	354 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	RPS4Y1	P22090	263 aa	Known RBP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZNF679	Q8IYX0	411 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	BCORP1	Q8N888	145 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	GTF3A	Q92664	365 aa	Known RBP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	COA3	Q9Y2R0	106 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	URGCP-MRPS24	S4R325	110 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	TRBV5-5	A0A0J9YX44	114 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	LOC107986453	A0A1B0GWG9	222 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	NKX2-2	O95096	273 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	CRH	P06850	196 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR13C7	P0DN81	318 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	RAB32	Q13637	225 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	VWA2	Q5GFL6	755 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	FHL5	Q5TD97	284 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	KCTD18	Q6PI47	426 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093		Q6ZRG5	221 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	GPR119	Q8TDV5	335 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	TAAR8	Q969N4	342 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	JSRP1	Q96MG2	331 aa	Predicted RBP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	OR11A1	Q9GZK7	315 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	PRTFDC1	Q9NRG1	225 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	PUS1	Q9Y606	427 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	NOTCH4	Q99466	2003 aa		12.8	□□□□□ -0.36
CIRBP-242	ENST00000593093	RP1	P56715	2156 aa		12.8	□□□□□ -0.36

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