RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	MAGEB18	Q96M61	343 aa		15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	ZNF570	Q96NI8	536 aa		15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	TBX15	Q96SF7	602 aa		15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	PKP2	Q99959	881 aa		15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	SH3GL1	Q99961	368 aa		15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	RBM4B	Q9BQ04	359 aa	Known RBP	15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	SYT4	Q9H2B2	425 aa		15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	ZNF446	Q9NWS9	450 aa		15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	GMPR2	Q9P2T1	348 aa	Known RBP	15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	CTSZ	Q9UBR2	303 aa		15.18	■□□□□ 0.02
CIRBP-238	ENST00000592412	FAM220BP	B1ANY3	271 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	TNFRSF13B	O14836	293 aa	Predicted RBP	15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	SLC16A7	O60669	478 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	RPL4	P36578	427 aa	Known RBP	15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	CFHR2	P36980	270 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	RAD23A	P54725	363 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	BPIFB3	P59826	476 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	TRAM2	Q15035	370 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	DCDC5	Q6ZRR9	648 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	PTCHD4	Q6ZW05	846 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	TMPRSS11F	Q6ZWK6	438 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	GLB1L2	Q8IW92	636 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412		Q8TCH9	128 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	ACOT11	Q8WXI4	607 aa	Predicted RBP	15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	APOBEC3D	Q96AK3	386 aa	Predicted RBP	15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	PCGF1	Q9BSM1	259 aa		15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	VSX1	Q9NZR4	365 aa	Predicted RBP	15.17	■□□□□ 0.02
CIRBP-238	ENST00000592412	CENPVL3	A0A0U1RRI6	287 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	LRRC30	A6NM36	301 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412		M0QZ24	198 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	XKRY	O14609	159 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	FCN3	O75636	299 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	CRYBA1	P05813	215 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	DBP	Q10586	325 aa	Predicted RBP	15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	KRR1	Q13601	381 aa	Known RBP	15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	KCNMB1	Q16558	191 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	MEP1B	Q16820	701 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	ZBED5	Q49AG3	693 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	COQ5	Q5HYK3	327 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	COLCA1	Q6ZS62	124 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	MBOAT2	Q6ZWT7	520 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	RNF113B	Q8IZP6	322 aa	Known RBP	15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	C1orf87	Q8N0U7	546 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	OR5L1	Q8NGL2	311 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	LINC01006	Q8NI28	216 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	RERGL	Q9H628	205 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	NMNAT1	Q9HAN9	279 aa	Predicted RBP	15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	INTS9	Q9NV88	658 aa	Known RBP	15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	TMCC3	Q9ULS5	477 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	LHFPL6	Q9Y693	200 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	POMT1	Q9Y6A1	747 aa		15.16	■□□□□ 0.02
CIRBP-238	ENST00000592412	DNAH3	Q8TD57	4116 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412		A0A0G2JND7	137 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	ZNF879	B4DU55	563 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	DCTN6	O00399	190 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	MRAS	O14807	208 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	ENSA	O43768	121 aa	Known RBP	15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	EDF1	O60869	148 aa	Known RBP	15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	FAM20B	O75063	409 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	KHDRBS3	O75525	346 aa	Known RBP	15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	FPR3	P25089	353 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	PROK1	P58294	105 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	FXYD6P3	P58550	94 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	MPPED2	Q15777	294 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	KRTAP27-1	Q3LI81	207 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	PRAMEF6	Q5VXH4	476 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	METTL21C	Q5VZV1	264 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	ZNF730	Q6ZMV8	503 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	ZNF620	Q6ZNG0	422 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	TSEN54	Q7Z6J9	526 aa	Known RBP	15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	FAM71F1	Q96KD3	344 aa	Predicted RBP	15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	COQ7	Q99807	217 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	FNDC11	Q9BVV2	318 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	NUAK2	Q9H093	628 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	SMURF1	Q9HCE7	757 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	NRIP3	Q9NQ35	241 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	RNF114	Q9Y508	228 aa		15.15	■□□□□ 0.02
CIRBP-238	ENST00000592412	NBEAL2	Q6ZNJ1	2754 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	TIMM23	O14925	209 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	PTP4A3	O75365	173 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	CLPX	O76031	633 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	TSPAN15	O95858	294 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	NPPA	P01160	153 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	IGHV4-59	P01825	116 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	IFNW1	P05000	195 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	SDHA	P31040	664 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	CD200	P41217	278 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	GK2	Q14410	553 aa	Predicted RBP	15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	CORO6	Q6QEF8	472 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	C1QL4	Q86Z23	238 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	OR2T12	Q8NG77	320 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	TSSK2	Q96PF2	358 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	GPX7	Q96SL4	187 aa	Predicted RBP	15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	HDHD2	Q9H0R4	259 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	TMEM100	Q9NV29	134 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	SIGLEC7	Q9Y286	467 aa		15.14	■□□□□ 0.01
CIRBP-238	ENST00000592412	P2RY10	O00398	339 aa		15.13	■□□□□ 0.01
CIRBP-238	ENST00000592412	GPR137B	O60478	399 aa		15.13	■□□□□ 0.01
CIRBP-238	ENST00000592412	TOX4	O94842	621 aa		15.13	■□□□□ 0.01
CIRBP-238	ENST00000592412	ANOS1	P23352	680 aa		15.13	■□□□□ 0.01

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