RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 GPR148Q8TDV2 347 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 PHYHIPQ92561 330 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 BCL2L2Q92843 193 aaPredicted RBP22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 SLC25A46Q96AG3 418 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 DERL3Q96Q80 235 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 BARHL1Q9BZE3 327 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 PBOV1Q9GZY1 135 aa22.75■■□□□ 1.23
SCAMP4-210ENST00000588555 ACOD1A6NK06 481 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 PIN1P1O15428 100 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 CLPXO76031 633 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 TTRP02766 147 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 SFTPCP11686 197 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 IGHV1-2P23083 117 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 CEACAM8P31997 349 aaPredicted RBP22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 MTNR1BP49286 362 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 GALK2Q01415 458 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 KRTAP27-1Q3LI81 207 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 SLC36A2Q495M3 483 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 OR1F12Q8NHA8 337 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 AKR7LQ8NHP1 331 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 SLC7A6Q92536 515 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 TPK1Q9H3S4 243 aa22.74■■□□□ 1.23
SCAMP4-210ENST00000588555 A0A1W2PPK0 400 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 IL2RAP01589 272 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 DBHP09172 617 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 ECH1Q13011 328 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 PCSK4Q6UW60 755 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF283Q8N7M2 679 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 NXF2Q9GZY0 626 aaKnown RBP22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 NOX4Q9NPH5 578 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 RTTNQ86VV8 2226 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 ARL6IP5O75915 188 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 HLA-HP01893 362 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 OCM2P0CE71 109 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 GLI4P10075 376 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 SLC2A1P11166 492 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 EDN3P14138 238 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF704Q6ZNC4 412 aaPredicted RBP22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 TBC1D15Q8TC07 691 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 SLC17A5Q9NRA2 495 aa22.73■■□□□ 1.23
SCAMP4-210ENST00000588555 TTLL8A6PVC2 850 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 F5H5K5 113 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 CASKO14936 926 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 UBCP0CG48 685 aaKnown RBP22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 COX5AP20674 150 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 LY6DQ14210 128 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 HIKESHIQ53FT3 197 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 PABPC1L2AQ5JQF8 200 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 GABRG1Q8N1C3 465 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 NOX3Q9HBY0 568 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF319Q9P2F9 582 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 TINAGQ9UJW2 476 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 PROCRQ9UNN8 238 aa22.72■■□□□ 1.23
SCAMP4-210ENST00000588555 TRBV5-7A0A0A0MS05 114 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 TRAV1-2A0A0B4J238 106 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 H3BSH0 61 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 M0R135 149 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ACSM4P0C7M7 580 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ACHEP22303 614 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF404Q494X3 552 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 NAA40Q86UY6 237 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 NR2C2APQ86WQ0 139 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 OR8B12Q8NGG6 310 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 SPTSSAQ969W0 71 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ORAI1Q96D31 301 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF799Q96GE5 643 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 A3GALT2U3KPV4 340 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 LOC107986453A0A1B0GWG9 222 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ERVH48-1M5A8F1 160 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 MAPK3P27361 379 aaPredicted RBP22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 SOX6P35712 828 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 HTR5AP47898 357 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 SOX2P48431 317 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 RORCP51449 518 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 HSD17B12Q53GQ0 312 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 SFRP5Q5T4F7 317 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 TMEM244Q5VVB8 128 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ZNF433Q8N7K0 673 aaPredicted RBP22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 CPEB3Q8NE35 698 aaKnown RBP22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ATPIF1Q9UII2 106 aa22.71■■□□□ 1.23
SCAMP4-210ENST00000588555 ARPC4-TTLL3A0A0A6YYG9 625 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 SMIM30A4D0T7 59 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 E9PLN8 166 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 P2RY10O00398 339 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 MYL9P24844 172 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 TGFBR3Q03167 851 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 HNRNPA0Q13151 305 aaKnown RBP22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 TBRG1Q3YBR2 411 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 ZNF610Q8N9Z0 462 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 MCFD2Q8NI22 146 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 ASB5Q8WWX0 329 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 TMEM106AQ96A25 262 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 OPN3Q9H1Y3 402 aaPredicted RBP22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 RNF121Q9H920 327 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 SLC24A3Q9HC58 644 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 B3GNT2Q9NY97 397 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 HHLA2Q9UM44 414 aa22.7■■□□□ 1.22
SCAMP4-210ENST00000588555 APOC1P02654 83 aa22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 CAV3P56539 151 aa22.69■■□□□ 1.22
SCAMP4-210ENST00000588555 HGFACQ04756 655 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms