RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 APH1AQ96BI3 265 aa3.43□□□□□ -1.86
CNOT1-209ENST00000566240 FOXC2Q99958 501 aa3.43□□□□□ -1.86
CNOT1-209ENST00000566240 DDX19BQ9UMR2 479 aa3.43□□□□□ -1.86
CNOT1-209ENST00000566240 YARS2Q9Y2Z4 477 aaKnown RBP3.43□□□□□ -1.86
CNOT1-209ENST00000566240 CACNG2Q9Y698 323 aa3.43□□□□□ -1.86
CNOT1-209ENST00000566240 ASXL1Q8IXJ9 1541 aa3.43□□□□□ -1.86
CNOT1-209ENST00000566240 PIK3C2GO75747 1445 aa3.43□□□□□ -1.86
CNOT1-209ENST00000566240 NRXN1Q9ULB1 1477 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 A0A1B0GUA9 196 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 A0A1W2PPV4 95 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 PLAC8L1A1L4L8 177 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 A6NDX4 124 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 K7EMT4 169 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 LAD1O00515 517 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 FARS2O95363 451 aaKnown RBP3.42□□□□□ -1.86
CNOT1-209ENST00000566240 SNAI1O95863 264 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-209ENST00000566240 TGM6O95932 706 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 IGLV2-23P01705 113 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 RAB3BP20337 219 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 CDKN2BP42772 138 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 CRISP3P54108 245 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 ZNF33AQ06730 810 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 RSPO1Q2MKA7 263 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-209ENST00000566240 RPEL1Q2QD12 228 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 TMEM255AQ5JRV8 349 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 C11orf53Q8IXP5 236 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 Q8N9W7 124 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 PIH1D2Q8WWB5 315 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 GIMAP1Q8WWP7 306 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 TMEM230Q96A57 120 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 CREB3L1Q96BA8 519 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 ELSPBP1Q96BH3 223 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 RNF185Q96GF1 192 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 HDHD3Q9BSH5 251 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-209ENST00000566240 LINC00597Q9H2U6 94 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 CDC42EP4Q9H3Q1 356 aaKnown RBP3.42□□□□□ -1.86
CNOT1-209ENST00000566240 DMAP1Q9NPF5 467 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-209ENST00000566240 PRSS16Q9NQE7 514 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 YEATS2Q9ULM3 1422 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 DIP2AQ14689 1571 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 ZBED9Q6R2W3 1325 aa3.42□□□□□ -1.86
CNOT1-209ENST00000566240 CAMTA1Q9Y6Y1 1673 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 IGLV1-36A0A0B4J1U3 117 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 A0A0J9YYE9 177 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 LOC100653049A0A140TA62 436 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 A0A1B0GUH1 482 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 NCBP2LA6PVI3 153 aaKnown RBP3.41□□□□□ -1.86
CNOT1-209ENST00000566240 FAM25EA8MYX2 175 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 PLPP1O14494 284 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 XRCC2O43543 280 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 ZNF861PO60384 105 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 HSBP1O75506 76 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 KRT34O76011 436 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 CSTAP01040 98 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 TRBC1P01850 177 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 FABP3P05413 133 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 STAG3L2P0CL84 134 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 CSNK2A2P19784 350 aaPredicted RBP3.41□□□□□ -1.86
CNOT1-209ENST00000566240 CEACAM3P40198 252 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 CEACAM6P40199 344 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 CXCL5P42830 114 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 LHX2P50458 406 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 PSMD4P55036 377 aaKnown RBP3.41□□□□□ -1.86
CNOT1-209ENST00000566240 LCN2P80188 198 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 POU2AF1Q16633 256 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 THEM4Q5T1C6 240 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 TPTE2P1Q5T6R2 138 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 LYPD2Q6UXB3 125 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 MBOAT2Q6ZWT7 520 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 CBLN2Q8IUK8 224 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 ZNF547Q8IVP9 402 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 OR52E2Q8NGJ4 325 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 OR51F2Q8NH61 342 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 BLOC1S5Q8TDH9 187 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 APH1BQ8WW43 257 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 TMEM158Q8WZ71 300 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 RAB1CQ92928 201 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 WFIKKN1Q96NZ8 548 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 ZIM3Q96PE6 472 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 DEFB129Q9H1M3 183 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 CD84Q9UIB8 345 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 ZNF318Q5VUA4 2279 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 LTBP1Q14766 1721 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 UBR1Q8IWV7 1749 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 EVC2Q86UK5 1308 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 NLRP1Q9C000 1473 aa3.41□□□□□ -1.86
CNOT1-209ENST00000566240 C3P01024 1663 aa3.4□□□□□ -1.86
CNOT1-209ENST00000566240 RIMS1Q86UR5 1692 aaKnown RBP3.4□□□□□ -1.86
CNOT1-209ENST00000566240 ZNF646O15015 1829 aaPredicted RBP3.4□□□□□ -1.86
CNOT1-209ENST00000566240 NKX2-6A6NCS4 301 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 KLLNB2CW77 178 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 PES1O00541 588 aaKnown RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 SPOPO43791 374 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 SS18L1O75177 396 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ZFYVE9O95405 1425 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 S100A9P06702 114 aaKnown RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 EIF4EP06730 217 aaKnown RBP3.4□□□□□ -1.87
CNOT1-209ENST00000566240 RETP07949 1114 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 KRTAP1-4P0C5Y4 121 aa3.4□□□□□ -1.87
CNOT1-209ENST00000566240 ATF6P18850 670 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms