RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 HTRA1Q92743 480 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 OR14A2Q96R54 314 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 ZNF416Q9BWM5 594 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 C6orf62Q9GZU0 229 aaPredicted RBP6.61□□□□□ -1.35
TPM1-231ENST00000561395 PRDM14Q9GZV8 571 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 COMMD4Q9H0A8 199 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 PPIL3Q9H2H8 161 aaKnown RBP6.61□□□□□ -1.35
TPM1-231ENST00000561395 C1orf198Q9H425 327 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 BCO1Q9HAY6 547 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 SMURF1Q9HCE7 757 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 B3GAT2Q9NPZ5 323 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 ASH2LQ9UBL3 628 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 FBXL3Q9UKT7 428 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 CAMK2AQ9UQM7 478 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 ZNF175Q9Y473 711 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 R4GMQ9 66 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 ABCA4P78363 2273 aa6.61□□□□□ -1.35
TPM1-231ENST00000561395 INTS1Q8N201 2190 aaKnown RBP6.61□□□□□ -1.35
TPM1-231ENST00000561395 ARHGAP21Q5T5U3 1957 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 TRAV1-2A0A0B4J238 106 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 TRBV5-5A0A0J9YX44 114 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 OR6C65A6NJZ3 312 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ZNF879B4DU55 563 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ZNF878C9JN71 531 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ARL6IP5O75915 188 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 PNPP00491 289 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 CRYABP02511 175 aaKnown RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 BMP4P12644 408 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 NPR2P20594 1047 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 MYL9P24844 172 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 DCTDP32321 178 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 GUCA1AP43080 201 aaPredicted RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 BMXP51813 675 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ART1P52961 327 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 DCTN2Q13561 401 aaKnown RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 ZNF846Q147U1 533 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 STK11Q15831 433 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 INAQ16352 499 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 SGCAQ16586 387 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ZNF829Q3KNS6 432 aaPredicted RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 PLXDC2Q6UX71 529 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 CHMP1BQ7LBR1 199 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 MRGPRGQ86SM5 289 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ADGRE4PQ86SQ3 457 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ZNF808Q8N4W9 903 aaPredicted RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 ZNF676Q8N7Q3 588 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 IL17RDQ8NFM7 739 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 OR2AJ1Q8NGZ0 328 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 S100ZQ8WXG8 99 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 AP3S1Q92572 193 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ZNF837Q96EG3 531 aaPredicted RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 CCDC120Q96HB5 630 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 DERL3Q96Q80 235 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 ALKBH3Q96Q83 286 aaPredicted RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 TAAR6Q96RI8 345 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 KCNS3Q9BQ31 491 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 RBM24Q9BX46 236 aaKnown RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 PRRG4Q9BZD6 226 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 LINC00470Q9BZP3 86 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 WDR12Q9GZL7 423 aaKnown RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 SLCO5A1Q9H2Y9 848 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 TPK1Q9H3S4 243 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 CRLF2Q9HC73 371 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 GPR35Q9HC97 309 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 GP6Q9HCN6 339 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 HMG20AQ9NP66 347 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 PNRC2Q9NPJ4 139 aaKnown RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 PARPBPQ9NWS1 579 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 CRNNQ9UBG3 495 aaPredicted RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 NOSIPQ9Y314 301 aaKnown RBP6.6□□□□□ -1.35
TPM1-231ENST00000561395 PEX16Q9Y5Y5 336 aa6.6□□□□□ -1.35
TPM1-231ENST00000561395 CSPG4Q6UVK1 2322 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 TRBV5-7A0A0A0MS05 114 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 ARPC4-TTLL3A0A0A6YYG9 625 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 A0A0G2JK05 382 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 SMIM30A4D0T7 59 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 ACOD1A6NK06 481 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 SLC22A20A6NK97 555 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 CLDN25C9JDP6 229 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 LOC110117498-PIK3R3F6TDL0 507 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 RPL36A-HNRNPH2H7BZ11 118 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 RER1O15258 196 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 MRPL33O75394 65 aaKnown RBP6.59□□□□□ -1.35
TPM1-231ENST00000561395 NCR1O76036 304 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 TGM6O95932 706 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 YES1P07947 543 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 CST2P09228 141 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 FCGR2AP12318 317 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 CFL1P23528 166 aaKnown RBP6.59□□□□□ -1.35
TPM1-231ENST00000561395 MAPK3P27361 379 aaPredicted RBP6.59□□□□□ -1.35
TPM1-231ENST00000561395 S100A5P33763 92 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 ETV6P41212 452 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 CAV3P56539 151 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 PSMA6P60900 246 aaKnown RBP6.59□□□□□ -1.35
TPM1-231ENST00000561395 HIST1H3AP68431 136 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 CEACAM16Q2WEN9 425 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 Q499Y3 187 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 HSD17B12Q53GQ0 312 aa6.59□□□□□ -1.35
TPM1-231ENST00000561395 BCL2L15Q5TBC7 163 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms