RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 MCOLN3Q8TDD5 553 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ZFP90Q8TF47 636 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 GEMIN6Q8WXD5 167 aaKnown RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 RORBQ92753 470 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 CCDC127Q96BQ5 260 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ADTRPQ96IZ2 230 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 KIR2DL4Q99706 377 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ARHGDIGQ99819 225 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 CCDC94Q9BW85 323 aaPredicted RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 SHCBP1LQ9BZQ2 653 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 WDR55Q9H6Y2 383 aaPredicted RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 LRRC19Q9H756 370 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 UGT1A7Q9HAW7 530 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 UGT1A8Q9HAW9 530 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ISYNA1Q9NPH2 558 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 IMP3Q9NV31 184 aaKnown RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 CD274Q9NZQ7 290 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 CLCF1Q9UBD9 225 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 ZNF629Q9UEG4 869 aaPredicted RBP2.91□□□□□ -1.94
TDP1-217ENST00000557782 OR51B2Q9Y5P1 312 aa2.91□□□□□ -1.94
TDP1-217ENST00000557782 POLR3AO14802 1390 aaPredicted RBP2.9□□□□□ -1.94
TDP1-217ENST00000557782 SYCE1LA8MT33 242 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 HIDE1A8MVS5 230 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 ZNF593O00488 134 aaPredicted RBP2.9□□□□□ -1.95
TDP1-217ENST00000557782 SLC31A2O15432 143 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 AQP9O43315 295 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 C6orf47O95873 294 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 IGHV3-48P01763 117 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 OR5AL1P0C617 328 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 HLA-GP17693 338 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 GABRG2P18507 467 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 ATF6P18850 670 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 COX7A1P24310 79 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 MAGEA2P43356 314 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 RND2P52198 227 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 APOC4P55056 127 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 VSX2P58304 361 aaPredicted RBP2.9□□□□□ -1.95
TDP1-217ENST00000557782 PRPS1P60891 318 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 MS4A2Q01362 244 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 C2orf54Q08AI8 447 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 STX4Q12846 297 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 MED21Q13503 144 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 KIAA0087Q14695 138 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 GPNMBQ14956 572 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 ZSCAN26Q16670 478 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 EXOC3L4Q17RC7 722 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 IDNKQ5T6J7 187 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 MFSD14CQ5VZR4 134 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 LCN12Q6JVE5 192 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 H2AFVQ71UI9 128 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 DCXRQ7Z4W1 244 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 MRPL52Q86TS9 123 aaKnown RBP2.9□□□□□ -1.95
TDP1-217ENST00000557782 NR2C2APQ86WQ0 139 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 FUNDC1Q8IVP5 155 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 Q8N377 158 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 OR51G1Q8NGK1 321 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 OR10Z1Q8NGY1 313 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 ING5Q8WYH8 240 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 FCRL1Q96LA6 429 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 LINC00479Q96M42 142 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 APOL2Q9BQE5 337 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 OSBPL11Q9BXB4 747 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 ING2Q9H160 280 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 DEFB127Q9H1M4 99 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 ZNF442Q9H7R0 627 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 METTL8Q9H825 291 aaKnown RBP2.9□□□□□ -1.95
TDP1-217ENST00000557782 SH2D2AQ9NP31 389 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 SLC25A37Q9NYZ2 338 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 USE1Q9NZ43 259 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 HMGXB4Q9UGU5 601 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 CYB5R1Q9UHQ9 305 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 AP3M1Q9Y2T2 418 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 MOB4Q9Y3A3 225 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 KLF12Q9Y4X4 402 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 RAD50Q92878 1312 aa2.9□□□□□ -1.95
TDP1-217ENST00000557782 A0A0B4J2E0 115 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 KRTAP9-6A0A140TA67 174 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 RDH16O75452 317 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 SNAP29O95721 258 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 RETP07949 1114 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 PGA4P0DJD7 388 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 PGA3P0DJD8 388 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 PGA5P0DJD9 388 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 OR5H8P0DN80 308 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 CD37P11049 281 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 LIPCP11150 499 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 RAB3BP20337 219 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 WARSP23381 471 aaKnown RBP2.89□□□□□ -1.95
TDP1-217ENST00000557782 MYL9P24844 172 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 CCNE1P24864 410 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 PRKAR2BP31323 418 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 BRCA1P38398 1863 aaKnown RBP2.89□□□□□ -1.95
TDP1-217ENST00000557782 CEACAM3P40198 252 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 MAGEA3P43357 314 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 PPICP45877 212 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 OR3A4PP47883 348 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 HCAR3P49019 387 aa2.89□□□□□ -1.95
TDP1-217ENST00000557782 MAGOHP61326 146 aaKnown RBP2.89□□□□□ -1.95
TDP1-217ENST00000557782 RPS21P63220 83 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms