RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 PLSCR3Q9NRY6 295 aa4.26□□□□□ -1.73
ATXN3-247ENST00000557311 MED11Q9P086 117 aa4.26□□□□□ -1.73
ATXN3-247ENST00000557311 TMEM216Q9P0N5 145 aa4.26□□□□□ -1.73
ATXN3-247ENST00000557311 XPR1Q9UBH6 696 aa4.26□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF639Q9UID6 485 aa4.26□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF225Q9UK10 706 aa4.26□□□□□ -1.73
ATXN3-247ENST00000557311 MCTS1Q9ULC4 181 aaKnown RBP4.26□□□□□ -1.73
ATXN3-247ENST00000557311 SSR3Q9UNL2 185 aa4.26□□□□□ -1.73
ATXN3-247ENST00000557311 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.26□□□□□ -1.734e-12■■■□□ 18.3
ATXN3-247ENST00000557311 ARHGAP21Q5T5U3 1957 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 TMEM89A2RUT3 159 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 ZAR1LA6NP61 321 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 MPTX1A8MV57 137 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 VWC2LB2RUY7 222 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 B4DXG7 233 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 TMEM238C9JI98 176 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 E7EQL1 145 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 LRRN3E7EW58 273 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 F5H697 171 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 H7C417 338 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 F2RL2O00254 374 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 SURF4O15260 269 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 FADS1O60427 444 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 BANF1O75531 89 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 UPK1BO75841 260 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 KRT33AO76009 404 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 ADAP00813 363 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 GBAP04062 536 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 RLN2P04090 185 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 ATP1B1P05026 303 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CLEC3BP05452 202 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 GUSBP08236 651 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CT45A8P0DMV1 189 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CT45A9P0DMV2 189 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CREB1P16220 341 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 ATP6V1B2P21281 511 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 PAICSP22234 425 aaKnown RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 IL12BP29460 328 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 LCN1P31025 176 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 THBS4P35443 961 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CAPGP40121 348 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 GPR4P46093 362 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 RGS6P49758 472 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 EMDP50402 254 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 PDLIM4P50479 330 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 FABP6P51161 128 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CCR4P51679 360 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 PPP5CP53041 499 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 RAB25P57735 213 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CXCR4P61073 352 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 TXNL4AP83876 142 aaKnown RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 ARF1P84077 181 aaKnown RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CHRNB3Q05901 458 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 FGL1Q08830 312 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 FOXI1Q12951 378 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 GGTLC2Q14390 218 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 EXOSC7Q15024 291 aaKnown RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 MED22Q15528 200 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 MAPK11Q15759 364 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 USF2Q15853 346 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 DGUOKQ16854 277 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 UGT3A2Q3SY77 523 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 MOGAT2Q3SYC2 334 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 TRMT12Q53H54 448 aaKnown RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 AKIRIN2Q53H80 203 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 PABPC1L2AQ5JQF8 200 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 C9orf152Q5JTZ5 239 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CLLU1Q5K131 121 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 C11orf71Q6IPW1 123 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 GRHL2Q6ISB3 625 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 ZBTB49Q6ZSB9 765 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 Q6ZSR9 355 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 GALNT10Q86SR1 603 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 P2RY8Q86VZ1 359 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CYP4Z1Q86W10 505 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 ZC3HC1Q86WB0 502 aaKnown RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 TGIF2LXQ8IUE1 241 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 TUSC5Q8IXB3 177 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 CDK20Q8IZL9 346 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 MUC15Q8N387 334 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 RNF175Q8N4F7 328 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 OR52R1Q8NGF1 315 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 OR6M1Q8NGM8 313 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 OR9A2Q8NGT5 310 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 OR10D3Q8NH80 312 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 NEK7Q8TDX7 302 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 DUSP19Q8WTR2 217 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 C10orf82Q8WW14 230 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 KAT2AQ92830 837 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 L3HYPDHQ96EM0 354 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 C1GALT1C1Q96EU7 318 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 C14orf144Q96I85 54 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 MS4A14Q96JA4 679 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 RNF170Q96K19 258 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 KLHL15Q96M94 604 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 MTERF1Q99551 399 aaKnown RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 ZNF2Q9BSG1 426 aaPredicted RBP4.25□□□□□ -1.73
ATXN3-247ENST00000557311 NANOGQ9H9S0 305 aa4.25□□□□□ -1.73
ATXN3-247ENST00000557311 SAYSD1Q9NPB0 183 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms