RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SHMT2P34897 504 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 NDUFA8P51970 172 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 KPNA2P52292 529 aaKnown RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 CSNK1G2P78368 415 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 OGDHQ02218 1023 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 EIF4EBP2Q13542 120 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 C16orf72Q14CZ0 275 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 HERPUD1Q15011 391 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 RCN1Q15293 331 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 MICBQ29980 383 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 ZCWPW2Q504Y3 356 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 DMRTC1Q5HYR2 192 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 C1orf100Q5SVJ3 147 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 TPRG1LQ5T0D9 272 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 PRAMEF20Q5VT98 475 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 OR2A2Q6IF42 318 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 ENPP6Q6UWR7 440 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 RFLNAQ6ZTI6 216 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 FAM183BPQ6ZVS7 135 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 PGAP1Q75T13 922 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 TMEM35BQ8NCS4 154 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 OR2L5Q8NG80 312 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 OR1L4Q8NGR5 311 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 FAM110BQ8TC76 370 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 STARD8Q92502 1023 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 ZNF75CPQ92670 426 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 TM4SF19Q96DZ7 209 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 TIMD4Q96H15 378 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 ZNF641Q96N77 438 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 GSDMAQ96QA5 445 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 RBKSQ9H477 322 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 ANKRD19PQ9H560 264 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 ASH1LQ9NR48 2969 aaKnown RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 AIG1Q9NVV5 245 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 TREM2Q9NZC2 230 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 TP53TG5Q9Y2B4 290 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 PHF3Q92576 2039 aaKnown RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 MYH9P35579 1960 aaKnown RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 GREB1Q4ZG55 1949 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 NUP210Q8TEM1 1887 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-216ENST00000548379 ZFYVE26Q68DK2 2539 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 FREM2Q5SZK8 3169 aa2.79□□□□□ -1.96
PTCH1-216ENST00000548379 SMG1Q96Q15 3661 aaKnown RBP2.78□□□□□ -1.96
PTCH1-216ENST00000548379 MTCL1Q9Y4B5 1905 aaKnown RBP2.78□□□□□ -1.96
PTCH1-216ENST00000548379 A0A1W2PPV9 198 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 A0A1W2PQ67 120 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 FAM25EA8MYX2 175 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 GOLGA8SH3BPF8 625 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 L7N2F9 121 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 DNALI1O14645 258 aaPredicted RBP2.78□□□□□ -1.96
PTCH1-216ENST00000548379 KDELR3O43731 214 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 DPM1O60762 260 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 ZMPSTE24O75844 475 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 SUPT7LO94864 414 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 HPNP05981 417 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 FGF4P08620 206 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 HOXC4P09017 264 aaPredicted RBP2.78□□□□□ -1.96
PTCH1-216ENST00000548379 THRAP10827 490 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 CCNB1P14635 433 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 FUT3P21217 361 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 CXCR2P25025 360 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 CD1CP29017 333 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 IL12AP29459 219 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 SDC4P31431 198 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 ACTR1BP42025 376 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 DLX1P56177 255 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 TLE4Q04727 773 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 BST1Q10588 318 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 OR5I1Q13606 314 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 SYCP1Q15431 976 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 SSX2Q16385 188 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 DGUOKQ16854 277 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 CTSL3PQ5NE16 218 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 C1orf185Q5T7R7 199 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 ARMC12Q5T9G4 340 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 CLEC18BQ6UXF7 455 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 H2BFWTQ7Z2G1 175 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 SLC34A3Q8N130 599 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 UBE2J2Q8N2K1 259 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 OTUD6BQ8N6M0 293 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 OR9K2Q8NGE7 335 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 RAB3IL1Q8TBN0 382 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 MARC2Q969Z3 335 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 CXorf40BQ96DE9 158 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 PDXPQ96GD0 296 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 TMEM101Q96IK0 257 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 CTRCQ99895 268 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 FAIM2Q9BWQ8 316 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 ULBP3Q9BZM4 244 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 ROPN1BQ9BZX4 212 aaPredicted RBP2.78□□□□□ -1.96
PTCH1-216ENST00000548379 MRPL40Q9NQ50 206 aaKnown RBP2.78□□□□□ -1.96
PTCH1-216ENST00000548379 FBXO8Q9NRD0 319 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 THUMPD1Q9NXG2 353 aaKnown RBP2.78□□□□□ -1.96
PTCH1-216ENST00000548379 ANAPC11Q9NYG5 84 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 OR12D3Q9UGF7 316 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 ASF1AQ9Y294 204 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 SNX10Q9Y5X0 201 aa2.78□□□□□ -1.96
PTCH1-216ENST00000548379 WDFY3Q8IZQ1 3526 aa2.77□□□□□ -1.97
PTCH1-216ENST00000548379 GCN1Q92616 2671 aaKnown RBP2.77□□□□□ -1.97
PTCH1-216ENST00000548379 LAMA5O15230 3695 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms