RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PFDN2Q9UHV9 154 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 C9orf170A2RU37 121 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 TOR1AO14656 332 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 SMAD9O15198 467 aaKnown RBP8.48□□□□□ -1.05
CNOT4-212ENST00000541284 SLC25A12O75746 678 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 CRABP1P29762 137 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 C3orf33Q6P1S2 294 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 DEGS2Q6QHC5 323 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 LYG2Q86SG7 212 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 APCDD1LQ8NCL9 501 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 FBXW5Q969U6 566 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 SOX7Q9BT81 388 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-212ENST00000541284 DNTTIP1Q9H147 329 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 KCNK7Q9Y2U2 307 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 FREM2Q5SZK8 3169 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 C2orf72A6NCS6 295 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 TMEM14DPA8MWL7 114 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 K7ESF4 209 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 TSPAN4O14817 238 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 EFSO43281 561 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 OR6A2O95222 327 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 NUDT14O95848 222 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 ZNF17P17021 662 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 NKPD1Q17RQ9 610 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 CFAP77Q6ZQR2 320 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 BEST3Q8N1M1 668 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 D2HGDHQ8N465 521 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 NKAIN3Q8N8D7 197 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 NFAM1Q8NET5 270 aaPredicted RBP8.48□□□□□ -1.05
CNOT4-212ENST00000541284 SSC4DQ8WTU2 575 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 NUDCD2Q8WVJ2 157 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 MRPL13Q9BYD1 178 aaKnown RBP8.48□□□□□ -1.05
CNOT4-212ENST00000541284 TPSD1Q9BZJ3 242 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 MED29Q9NX70 200 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 UPB1Q9UBR1 384 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 CYB5R1Q9UHQ9 305 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 ASXL3Q9C0F0 2248 aa8.48□□□□□ -1.05
CNOT4-212ENST00000541284 IGHV1OR21-1A0A087WYE8 117 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 A0A0D9SG52 128 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 MEGF11A6BM72 1044 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 OR6C76A6NM76 312 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 CYB5AP00167 134 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 HLA-AP01891 365 aaKnown RBP8.47□□□□□ -1.05
CNOT4-212ENST00000541284 CD2P06729 351 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 ATF4P18848 351 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-212ENST00000541284 HSD11B1P28845 292 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 CLDN6P56747 220 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 OR1D5P58170 312 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 GMFBP60983 142 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 SHBQ15464 509 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 NSDHLQ15738 373 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 C14orf28Q4W4Y0 310 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 LIN54Q6MZP7 749 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 LPCAT3Q6P1A2 487 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 OR2W3Q7Z3T1 314 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 GKN2Q86XP6 184 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 JAGN1Q8N5M9 183 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 ZDHHC22Q8N966 263 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 CADM4Q8NFZ8 388 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 PPP1R1CQ8WVI7 109 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 FGGYQ96C11 551 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 PHF7Q9BWX1 381 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-212ENST00000541284 CKLFQ9UBR5 152 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 PLEKHA6Q9Y2H5 1048 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 B3GALT1Q9Y5Z6 326 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 WDFY4Q6ZS81 3184 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 BSNQ9UPA5 3926 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 TMEM269A0A1B0GVZ9 245 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 ANKUB1A6NFN9 424 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 FAM74A7A6NL05 159 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 LMO7DNF2Z398 122 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 KCNAB3O43448 404 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 OR2F2O95006 317 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 GP1BAP07359 652 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 CD34P28906 385 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 LUMP51884 338 aaPredicted RBP8.47□□□□□ -1.05
CNOT4-212ENST00000541284 CAPZA1P52907 286 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 PPIAP62937 165 aaKnown RBP8.47□□□□□ -1.05
CNOT4-212ENST00000541284 OR2F1Q13607 317 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 FAM74A3Q4VXF1 159 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 C11orf88Q6PI97 169 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 TMPRSS9Q7Z410 1059 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 TRAPPC6BQ86SZ2 158 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 CD163Q86VB7 1156 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 DTX1Q86Y01 620 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 OR5AS1Q8N127 324 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 OR10K1Q8NGX5 313 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 MFSD8Q8NHS3 518 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 C11orf40Q8WZ69 217 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 SEC22AQ96IW7 307 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 NICN1Q9BSH3 213 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 ZNF319Q9P2F9 582 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 RAB22AQ9UL26 194 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 FARSAQ9Y285 508 aaKnown RBP8.47□□□□□ -1.05
CNOT4-212ENST00000541284 SEC16AO15027 2179 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 IGHV3-20A0A0C4DH32 117 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 SHISA8B8ZZ34 492 aa8.47□□□□□ -1.05
CNOT4-212ENST00000541284 AHSA1O95433 338 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms