RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 DCAF13Q9NV06 445 aaKnown RBP3.43□□□□□ -1.86
ECHDC1-223ENST00000534442 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.43□□□□□ -1.86
ECHDC1-223ENST00000534442 KLRF1Q9NZS2 232 aa3.43□□□□□ -1.86
ECHDC1-223ENST00000534442 AUP1Q9Y679 476 aa3.43□□□□□ -1.86
ECHDC1-223ENST00000534442 DOCK11Q5JSL3 2073 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 TRBV11-1A0A0K0K1C0 115 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 SAGE2PA6NJ88 616 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 C16orf90A8MZG2 172 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 H0YGG7 62 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 ABCD4O14678 606 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 TYROBPO43914 113 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 MGRN1O60291 552 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 MFN2O95140 757 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 MPZL1O95297 269 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 WNT2P09544 360 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 FOXN2P32314 431 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 SLC7A2P52569 658 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 BNIP1Q12981 228 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 C17orf58Q2M2W7 97 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 BCL7AQ4VC05 210 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 KLF17Q5JT82 389 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 OR2A2Q6IF42 318 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 REG3GQ6UW15 175 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 BTNL3Q6UXE8 466 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 APOOLQ6UXV4 268 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 ZNF841Q6ZN19 808 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 ZNF620Q6ZNG0 422 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 ZNF497Q6ZNH5 498 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 CENPUQ71F23 418 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 KRTAP7-1Q8IUC3 87 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 ZDHHC21Q8IVQ6 265 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 CSNK1A1LQ8N752 337 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 OR5AR1Q8NGP9 310 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 OR51Q1Q8NH59 317 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 DTX3LQ8TDB6 740 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 OSTF1Q92882 214 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 TSLPQ969D9 159 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 DNAJA3Q96EY1 480 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 ATF6BQ99941 703 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 CCDC77Q9BR77 488 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 UGT2B28Q9BY64 529 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 POLR1EQ9GZS1 481 aaKnown RBP3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 RMND5AQ9H871 391 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 ELL3Q9HB65 397 aaPredicted RBP3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 C1orf123Q9NWV4 160 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 CLCF1Q9UBD9 225 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 CIDEBQ9UHD4 219 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 AP4B1Q9Y6B7 739 aa3.42□□□□□ -1.86
ECHDC1-223ENST00000534442 MFSD2BA6NFX1 497 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 H0YHG0 523 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 TXNDC9O14530 226 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 TM9SF1O15321 606 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 TRAPPC6AO75865 159 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 NSA2O95478 260 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 IGHV3-9P01782 118 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 CCL3P10147 92 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 UQCRBP14927 111 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 CPN1P15169 458 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 CD9P21926 228 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 GDF1P27539 372 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 CASP1P29466 404 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 PPP2R1BP30154 601 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 SPRP35270 261 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 HNMTP50135 292 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 MFAP2P55001 183 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 AIF1P55008 147 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 CDH6P55285 790 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 EMX1Q04741 257 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 PAX8Q06710 450 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 NDUFA9Q16795 377 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 MRGPRG-AS1Q2M3A8 158 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 SLC36A3Q495N2 470 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 GFI1BQ5VTD9 330 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 SLC22A10Q63ZE4 541 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 ZNF343Q6P1L6 599 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 EMBQ6PCB8 327 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 TSEN54Q7Z6J9 526 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 SERPINA9Q86WD7 417 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 ABHD12Q8N2K0 398 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 Q8N377 158 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 NPWQ8N729 165 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 APCDD1LQ8NCL9 501 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 OR5AU1Q8NGC0 362 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 OR9A4Q8NGU2 314 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 OR5K2Q8NHB8 316 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 FAM172AQ8WUF8 416 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 S100PBPQ96BU1 408 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 UPRTQ96BW1 309 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 DHTKD1Q96HY7 919 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 JSRP1Q96MG2 331 aaPredicted RBP3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 RHOJQ9H4E5 214 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 C16orf95Q9H693 158 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 MEAF6Q9HAF1 191 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 UGT1A10Q9HAW8 530 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 NT5MQ9NPB1 228 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 IL26Q9NPH9 171 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 FANCFQ9NPI8 374 aa3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 FARSBQ9NSD9 589 aaKnown RBP3.41□□□□□ -1.86
ECHDC1-223ENST00000534442 ASF1AQ9Y294 204 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms