RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CNRIP1Q96F85 164 aaPredicted RBP13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 MCCD1P59942 119 aaPredicted RBP13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 ZNF626Q68DY1 528 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 DEFB108BQ8NET1 73 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 ALG14Q96F25 216 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 BANF2Q9H503 90 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 WNK3Q9BYP7 1800 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 ANKRD61A6NGH8 418 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 NRASP01111 189 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 CLEC2LP0C7M8 214 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 RTL8BQ17RB0 113 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 DMRTC1Q5HYR2 192 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 DTWD2Q8NBA8 298 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 ARV1Q9H2C2 271 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 PRSS37A4D1T9 235 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 PTBP1P26599 531 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 ZNF683Q8IZ20 524 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 SYS1Q8N2H4 156 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 UGT2A1Q9Y4X1 527 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 PPP3CBP16298 524 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 DRD3P35462 400 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 GABRA4P48169 554 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 EGR3Q06889 387 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 Q6ZRG5 221 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 TMEM99Q8N816 258 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 OR1S2Q8NGQ3 325 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 GNB4Q9HAV0 340 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 GNG13Q9P2W3 67 aa13.4□□□□□ -0.26
PCDHA9-202ENST00000532602 TRGV5A0A0B4J1U4 118 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 NPBWR1P48145 328 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 CCR9P51686 369 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 OR1C1Q15619 314 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 OR10K1Q8NGX5 313 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 PLK3Q9H4B4 646 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 MEIKINA0A087WXM9 373 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 HLA-DOBP13765 273 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 RFX2P48378 723 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 ETV1P50549 477 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 TMPRSS7Q7RTY8 843 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 ARPC5LQ9BPX5 153 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 SAMD10Q9BYL1 202 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 GPATCH2Q9NW75 528 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 ANKUB1A6NFN9 424 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 BHLHE40O14503 412 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 FXNQ16595 210 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 SYT6Q5T7P8 510 aaPredicted RBP13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 LAIR1Q6GTX8 287 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 ACSM5Q6NUN0 579 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 OR13F1Q8NGS4 319 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF705FA8MVS1 300 aaPredicted RBP13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF705DP0CH99 300 aaPredicted RBP13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF705BP0CI00 300 aaPredicted RBP13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 RGS7BPQ6MZT1 257 aaPredicted RBP13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 GAB3Q8WWW8 586 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 TMEM200CA6NKL6 621 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 GPR12P47775 334 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 FOXF1Q12946 379 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 PCK2Q16822 640 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 PHLDA2Q53GA4 152 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 GINS3Q9BRX5 216 aa13.39□□□□□ -0.27
PCDHA9-202ENST00000532602 SULT1C4O75897 302 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 CPEP16870 476 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 TNFRSF1AP19438 455 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 INSM1Q01101 510 aaPredicted RBP13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 TMEM200AQ86VY9 491 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 ZFP82Q8N141 532 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 NANOGP1Q8N7R0 232 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 GON7Q9BXV9 100 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 P4HTMQ9NXG6 502 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 A3GALT2U3KPV4 340 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 M0QYG6 137 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 ZDHHC23Q8IYP9 409 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 LINC01555Q8NAE3 123 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 FAM213BQ8TBF2 198 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 SLCO4A1Q96BD0 722 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 SEC22AQ96IW7 307 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 TAS2R4Q9NYW5 299 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 CACFD1Q9UGQ2 172 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 ARFGEF1Q9Y6D6 1849 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 ZNF638Q14966 1978 aaKnown RBP13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 TCRBP04435 133 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 TRIP6Q15654 476 aaKnown RBP13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 CMTM4Q8IZR5 234 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 OR51A4Q8NGJ6 313 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 FADS1O60427 444 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 CTSVO60911 334 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 NPY4RP50391 375 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 C16orf47Q6ZP98 133 aaPredicted RBP13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 OR51H1Q8NH63 302 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 EID2BQ96D98 161 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 HINT3Q9NQE9 182 aaKnown RBP13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 TAS2R5Q9NYW4 299 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 ING1Q9UK53 422 aaPredicted RBP13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 APEX1P27695 318 aaKnown RBP13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 MC2RQ01718 297 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 C15orf54Q8N8G6 183 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 GPR84Q9NQS5 396 aa13.38□□□□□ -0.27
PCDHA9-202ENST00000532602 A0A0B4J2A0 478 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 M0QZ24 198 aa13.37□□□□□ -0.27
PCDHA9-202ENST00000532602 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms