RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 HNF1AP20823 631 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 C1orf87Q8N0U7 546 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 RPL3LQ92901 407 aaKnown RBP13.02□□□□□ -0.32
TRIO-222ENST00000515144 KTI12Q96EK9 354 aaPredicted RBP13.02□□□□□ -0.32
TRIO-222ENST00000515144 ATF6BQ99941 703 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 TMEM43Q9BTV4 400 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 PLXND1Q9Y4D7 1925 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 GDPD1Q8N9F7 314 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 OR5M11Q96RB7 305 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 CCDC32Q9BV29 185 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 DNAJB6O75190 326 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 SERPINF1P36955 418 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 FGFBP1Q14512 234 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 LINC01555Q8NAE3 123 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 KCNG3Q8TAE7 436 aa13.02□□□□□ -0.32
TRIO-222ENST00000515144 A0A0A6YYD5 115 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 SLC16A6O15403 523 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 HTR2AP28223 471 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 SSTR2P30874 369 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 TESK1Q15569 626 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 LOC100289279A0A1B0GTE1 492 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 FITM1A5D6W6 292 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 I6L893 689 aaPredicted RBP13.02□□□□□ -0.33
TRIO-222ENST00000515144 FKBP2P26885 142 aaKnown RBP13.02□□□□□ -0.33
TRIO-222ENST00000515144 SLC6A12P48065 614 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 SPNS3Q6ZMD2 512 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 EML2O95834 649 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 APOC3P02656 99 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 DUSP1P28562 367 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 PNLIPRP2P54317 469 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 MFGE8Q08431 387 aaPredicted RBP13.02□□□□□ -0.33
TRIO-222ENST00000515144 PLK5Q496M5 336 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 OR10AD1Q8NGE0 317 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 SLC25A31Q9H0C2 315 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 CNOT2Q9NZN8 540 aaKnown RBP13.02□□□□□ -0.33
TRIO-222ENST00000515144 TAAR3PQ9P1P4 343 aa13.02□□□□□ -0.33
TRIO-222ENST00000515144 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.33
TRIO-222ENST00000515144 PRSS37A4D1T9 235 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 EBPQ15125 230 aaKnown RBP13.01□□□□□ -0.33
TRIO-222ENST00000515144 GSG1Q2KHT4 349 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 OR10D3Q8NH80 312 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 TCFL5Q9UL49 500 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 OSGIN2Q9Y236 505 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 UPK1BO75841 260 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 CPEP16870 476 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 RTL8BQ17RB0 113 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 SFXN4Q6P4A7 337 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 ZNF573Q86YE8 665 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 SFTPA2Q8IWL1 248 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 PKMYT1Q99640 499 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 A0A0B4J2A0 478 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 WDR1O75083 606 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 HTR2BP41595 481 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 SMIM15Q7Z3B0 74 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 CNRIP1Q96F85 164 aaPredicted RBP13.01□□□□□ -0.33
TRIO-222ENST00000515144 SHPKQ9UHJ6 478 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 GDF2Q9UK05 429 aaPredicted RBP13.01□□□□□ -0.33
TRIO-222ENST00000515144 H3BMH7 237 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 OLFM2O95897 454 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 GK2Q14410 553 aaPredicted RBP13.01□□□□□ -0.33
TRIO-222ENST00000515144 HFEQ30201 348 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 LIPNQ5VXI9 398 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 KIRREL2Q6UWL6 708 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 POC1BQ8TC44 478 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 SLC7A13Q8TCU3 470 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 ST8SIA1Q92185 356 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 RND1Q92730 232 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 TXNL4BQ9NX01 149 aaKnown RBP13.01□□□□□ -0.33
TRIO-222ENST00000515144 CHST2Q9Y4C5 530 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 TMEM82A0PJX8 343 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 ANKUB1A6NFN9 424 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 CHRNB1P11230 501 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 MCCD1P59942 119 aaPredicted RBP13.01□□□□□ -0.33
TRIO-222ENST00000515144 LRRC10Q5BKY1 277 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 ACSM5Q6NUN0 579 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 LHFPL2Q6ZUX7 228 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 MRI1Q9BV20 369 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 PUS1Q9Y606 427 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRIO-222ENST00000515144 SPTBN2O15020 2390 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 LOC107986453A0A1B0GWG9 222 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 SOD1P00441 154 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 OR10J4P0C629 311 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 FAM198BQ6UWH4 519 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 ANKRD13BQ86YJ7 626 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 ARIH2OSQ8N7S6 290 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 SLC26A1Q9H2B4 701 aa13.01□□□□□ -0.33
TRIO-222ENST00000515144 A0A087WV62 115 aa13□□□□□ -0.33
TRIO-222ENST00000515144 RAB40ALP0C0E4 278 aa13□□□□□ -0.33
TRIO-222ENST00000515144 SRP9P49458 86 aaKnown RBP13□□□□□ -0.33
TRIO-222ENST00000515144 ZNF816Q0VGE8 651 aaPredicted RBP13□□□□□ -0.33
TRIO-222ENST00000515144 PRAMEF5Q5TYX0 476 aa13□□□□□ -0.33
TRIO-222ENST00000515144 PRAMEF6Q5VXH4 476 aa13□□□□□ -0.33
TRIO-222ENST00000515144 ZNF546Q86UE3 836 aa13□□□□□ -0.33
TRIO-222ENST00000515144 CLDN22Q8N7P3 220 aa13□□□□□ -0.33
TRIO-222ENST00000515144 OR10V1Q8NGI7 309 aa13□□□□□ -0.33
TRIO-222ENST00000515144 NT5CQ8TCD5 201 aa13□□□□□ -0.33
TRIO-222ENST00000515144 RAB40AQ8WXH6 277 aa13□□□□□ -0.33
TRIO-222ENST00000515144 ADAT1Q9BUB4 502 aaKnown RBP13□□□□□ -0.33
TRIO-222ENST00000515144 F8W036 122 aa13□□□□□ -0.33
TRIO-222ENST00000515144 PATE4P0C8F1 98 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms