RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 FAM172BPA6NC97 362 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 A6NJ64 397 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 OR4C45A6NMZ5 311 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 DNPH1O43598 174 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 PRAF2O60831 178 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 AKR7A3O95154 331 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 PMS2P2O95744 297 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 P04436 131 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 RNF224P0DH78 156 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 SPNP16150 400 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 ATF1P18846 271 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 HSD11B1P28845 292 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 ECI1P42126 302 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 RFX2P48378 723 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 RPS11P62280 158 aaKnown RBP eCLIP8.44□□□□□ -1.06
MSH3-203ENST00000512531 CHAF1BQ13112 559 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 MAB21L1Q13394 359 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 SNTB2Q13425 540 aaKnown RBP8.44□□□□□ -1.06
MSH3-203ENST00000512531 P2RY14Q15391 338 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 RAB11BQ15907 218 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 EIF2S3LQ2VIR3 472 aaKnown RBP8.44□□□□□ -1.06
MSH3-203ENST00000512531 TBRG1Q3YBR2 411 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 PDSS1Q5T2R2 415 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 FAM27D1Q5T7N8 215 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 BCL2L15Q5TBC7 163 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 SEZ6L2Q6UXD5 910 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 RPS19BP1Q86WX3 136 aaKnown RBP8.44□□□□□ -1.06
MSH3-203ENST00000512531 SLC38A9Q8NBW4 561 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 OR10G3Q8NGC4 313 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 OR1J4Q8NGS1 313 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 LGALS14Q8TCE9 139 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 SMIM4Q8WVI0 70 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 INTS12Q96CB8 462 aaKnown RBP8.44□□□□□ -1.06
MSH3-203ENST00000512531 SLC25A44Q96H78 314 aaPredicted RBP8.44□□□□□ -1.06
MSH3-203ENST00000512531 Q96M66 194 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 ZFP3Q96NJ6 502 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 TSSK2Q96PF2 358 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 PIGQQ9BRB3 760 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 TRAF4Q9BUZ4 470 aaPredicted RBP8.44□□□□□ -1.06
MSH3-203ENST00000512531 OR11A1Q9GZK7 315 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 NEK6Q9HC98 313 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 PTTG3PQ9NZH4 202 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 ERRFI1Q9UJM3 462 aaPredicted RBP8.44□□□□□ -1.06
MSH3-203ENST00000512531 MPDZO75970 2070 aa8.44□□□□□ -1.06
MSH3-203ENST00000512531 TEP1Q99973 2627 aaKnown RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 ACOD1A6NK06 481 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 NPIPA2E9PIF3 369 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 NPIPA3F8WFD2 350 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 H3BML4 177 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 SULT2B1O00204 365 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 PSMD9O00233 223 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 PLA2G10O15496 165 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 TPD52L2O43399 206 aaKnown RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 CBR3O75828 277 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 CLDN1O95832 211 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 ABHD16AO95870 558 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 ISG15P05161 165 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 CTLA4P16410 223 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 FSTP19883 344 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 RAB6AP20340 208 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 C4BPBP20851 252 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 STOMP27105 288 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 CFPP27918 469 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 LAP3P28838 519 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 ERP29P30040 261 aaKnown RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 HOXC12P31275 282 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 GNALP38405 381 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 KIR2DL3P43628 341 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 SOX2P48431 317 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 MYBPHQ13203 477 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 MRPL49Q13405 166 aaKnown RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 MELKQ14680 651 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 SSPNQ14714 243 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 PCOLCEQ15113 449 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 ZNF239Q16600 458 aaKnown RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 TATDN3Q17R31 274 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 SLC25A35Q3KQZ1 300 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 HES5Q5TA89 166 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 OR5M10Q6IEU7 315 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 FAM198BQ6UWH4 519 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 GTPBP8Q8N3Z3 284 aaPredicted RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 RFLNBQ8N5W9 214 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 FADS6Q8N9I5 356 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 NOXO1Q8NFA2 376 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 OR13C3Q8NGS6 347 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 OR13C5Q8NGS8 318 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 OR6X1Q8NH79 312 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 SYNPRQ8TBG9 265 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 SMAP2Q8WU79 429 aaPredicted RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 DACT3Q96B18 629 aaPredicted RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 C8orf44Q96CB5 159 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 HAVCR1Q96D42 359 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 SNRNP40Q96DI7 357 aaKnown RBP8.43□□□□□ -1.06
MSH3-203ENST00000512531 FER1L6-AS2Q96M78 137 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 OR5B2Q96R09 309 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 OR2M2Q96R28 347 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 ABHD6Q9BV23 337 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 RTN4RQ9BZR6 473 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 MED28Q9H204 178 aa8.43□□□□□ -1.06
MSH3-203ENST00000512531 MMP28Q9H239 520 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms