RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 BCL2L2Q92843 193 aaPredicted RBP18.93■□□□□ 0.62
SMC4-221ENST00000489573 SPTSSAQ969W0 71 aa18.93■□□□□ 0.62
SMC4-221ENST00000489573 NCOA6Q14686 2063 aaPredicted RBP18.92■□□□□ 0.62
SMC4-221ENST00000489573 ARL6IP5O75915 188 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 APOC1P02654 83 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 UCHL1P09936 223 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 UBCP0CG48 685 aaKnown RBP18.92■□□□□ 0.62
SMC4-221ENST00000489573 CRYGSP22914 178 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 MYL9P24844 172 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 MAPK3P27361 379 aaPredicted RBP18.92■□□□□ 0.62
SMC4-221ENST00000489573 MTNR1BP49286 362 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 LSAMPQ13449 338 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 NANOS1Q8WY41 292 aaKnown RBP18.92■□□□□ 0.62
SMC4-221ENST00000489573 SFXN3Q9BWM7 321 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 PPIL3Q9H2H8 161 aaKnown RBP18.92■□□□□ 0.62
SMC4-221ENST00000489573 SNTG1Q9NSN8 517 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 TINAGQ9UJW2 476 aa18.92■□□□□ 0.62
SMC4-221ENST00000489573 F5H5K5 113 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 M0R135 149 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 CASKO14936 926 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 UBL3O95164 117 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 HLA-HP01893 362 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 ISG15P05161 165 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 OCM2P0CE71 109 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 COX5AP20674 150 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 ACHEP22303 614 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 SOX6P35712 828 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 HTR5AP47898 357 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 MXD1Q05195 221 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 TBRG1Q3YBR2 411 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 PABPC1L2AQ5JQF8 200 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 TMEM244Q5VVB8 128 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 OR10AC1Q8NH08 325 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 TSEN15Q8WW01 171 aaKnown RBP18.91■□□□□ 0.62
SMC4-221ENST00000489573 THRSPQ92748 146 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 ZNF799Q96GE5 643 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 DERL3Q96Q80 235 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 SLIRPQ9GZT3 109 aaKnown RBP18.91■□□□□ 0.62
SMC4-221ENST00000489573 ATPIF1Q9UII2 106 aa18.91■□□□□ 0.62
SMC4-221ENST00000489573 ARPC4-TTLL3A0A0A6YYG9 625 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 SHISA3A0PJX4 238 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 ACOD1A6NK06 481 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 TTRP02766 147 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 ANXA2P07355 339 aaKnown RBP18.9■□□□□ 0.62
SMC4-221ENST00000489573 CLEC2LP0C7M8 214 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 SLC2A1P11166 492 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 CD79AP11912 226 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 ARR3P36575 388 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 RSPO1Q2MKA7 263 aaPredicted RBP18.9■□□□□ 0.62
SMC4-221ENST00000489573 HIKESHIQ53FT3 197 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 TMEM53Q6P2H8 277 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 GABRG1Q8N1C3 465 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 ZNF433Q8N7K0 673 aaPredicted RBP18.9■□□□□ 0.62
SMC4-221ENST00000489573 ZNF610Q8N9Z0 462 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 SLC7A6Q92536 515 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 OPN3Q9H1Y3 402 aaPredicted RBP18.9■□□□□ 0.62
SMC4-221ENST00000489573 SLC24A3Q9HC58 644 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 NOX4Q9NPH5 578 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 SLC17A5Q9NRA2 495 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 ITPR1Q14643 2758 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 PKD1L2Q7Z442 2459 aa18.9■□□□□ 0.62
SMC4-221ENST00000489573 LOC107986453A0A1B0GWG9 222 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 A0A1W2PPK0 400 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 ZNF503-AS2A6NEH8 195 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 LYZL6O75951 148 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 CLPXO76031 633 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 DBHP09172 617 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 MAGEB1P43366 347 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 SLC6A9P48067 706 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 SOX2P48431 317 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 TPTEP56180 551 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 KRTAP27-1Q3LI81 207 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 HSD17B12Q53GQ0 312 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 PCSK4Q6UW60 755 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 FAM57BQ71RH2 274 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 PRSS45Q7RTY3 260 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 OR8B12Q8NGG6 310 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 OR51A4Q8NGJ6 313 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 SLC25A46Q96AG3 418 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 DACH2Q96NX9 599 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 TPK1Q9H3S4 243 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 HHLA2Q9UM44 414 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 N6AMT1Q9Y5N5 214 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 PMF1-BGLAPU3KQ54 211 aa18.89■□□□□ 0.62
SMC4-221ENST00000489573 TRAV1-2A0A0B4J238 106 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 CIB4A0PJX0 185 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 H3BSH0 61 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 P2RY10O00398 339 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 PIN1P1O15428 100 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 RAD51DO75771 328 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 ACSM4P0C7M7 580 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 RORCP51449 518 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 DRAM2Q6UX65 266 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 BEND4Q6ZU67 534 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 ST6GALNAC3Q8NDV1 305 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 C1orf162Q8NEQ5 155 aaPredicted RBP18.89■□□□□ 0.61
SMC4-221ENST00000489573 NOX3Q9HBY0 568 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 SH3BGRL2Q9UJC5 107 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 DHDHQ9UQ10 334 aa18.89■□□□□ 0.61
SMC4-221ENST00000489573 TRBV5-7A0A0A0MS05 114 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms