RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 COMMD4Q9H0A8 199 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 TPK1Q9H3S4 243 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 NIPAL2Q9H841 368 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 NOX3Q9HBY0 568 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 SNTG1Q9NSN8 517 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 C5orf63A6NC05 138 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 OR6C6A6NF89 314 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 ACOD1A6NK06 481 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 ERVH48-1M5A8F1 160 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 LYZL6O75951 148 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 SERPINA3P01011 423 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 CRHP06850 196 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 SFTPCP11686 197 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 EDN3P14138 238 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 CTSSP25774 331 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 SH3BGRP55822 239 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-207ENST00000486080 PMPCAQ10713 525 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 TSC22D1Q15714 1073 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 PABPC1L2AQ5JQF8 200 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 ANKRD16Q6P6B7 361 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 UNQ9370/PRO34162Q6UXP9 181 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 NCCRP1Q6ZVX7 275 aaPredicted RBP12.6□□□□□ -0.39
COL9A1-207ENST00000486080 CPEB3Q8NE35 698 aaKnown RBP12.6□□□□□ -0.39
COL9A1-207ENST00000486080 OR1F12Q8NHA8 337 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 TSC22D3Q99576 134 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 HDHD2Q9H0R4 259 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 RNF121Q9H920 327 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF319Q9P2F9 582 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 PROCRQ9UNN8 238 aa12.6□□□□□ -0.39
COL9A1-207ENST00000486080 TRBV5-5A0A0J9YX44 114 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 ZNF879B4DU55 563 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 E9PLN8 166 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 P2RY10O00398 339 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 PIN1P1O15428 100 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 TTRP02766 147 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 CD79AP11912 226 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 CRYGSP22914 178 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 OTX1P32242 354 aaPredicted RBP12.59□□□□□ -0.39
COL9A1-207ENST00000486080 SOX2P48431 317 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 SLC36A2Q495M3 483 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 SFRP5Q5T4F7 317 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 ELMOD2Q8IZ81 293 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 GABRG1Q8N1C3 465 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 BARHL1Q9BZE3 327 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 SLIRPQ9GZT3 109 aaKnown RBP12.59□□□□□ -0.39
COL9A1-207ENST00000486080 NOX4Q9NPH5 578 aa12.59□□□□□ -0.39
COL9A1-207ENST00000486080 RAD51DO75771 328 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 NCR1O76036 304 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 CNOT4O95628 575 aaKnown RBP12.58□□□□□ -0.4
COL9A1-207ENST00000486080 ANXA2P07355 339 aaKnown RBP12.58□□□□□ -0.4
COL9A1-207ENST00000486080 UCHL1P09936 223 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 OCM2P0CE71 109 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 HTR5AP47898 357 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 CAV3P56539 151 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 HGFACQ04756 655 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 RBPJQ06330 500 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 ST3GAL2Q16842 350 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 TBRG1Q3YBR2 411 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 Q499Y3 187 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 FAM57BQ71RH2 274 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 PRSS45Q7RTY3 260 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 ZNF433Q8N7K0 673 aaPredicted RBP12.58□□□□□ -0.4
COL9A1-207ENST00000486080 GPR148Q8TDV2 347 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 ZFP3Q96NJ6 502 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 DERL3Q96Q80 235 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 SLC24A3Q9HC58 644 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 NUFIP1Q9UHK0 495 aaKnown RBP12.58□□□□□ -0.4
COL9A1-207ENST00000486080 COL6A6A6NMZ7 2263 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 PCNX1Q96RV3 2341 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 LOC107986453A0A1B0GWG9 222 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 A0A1W2PR80 420 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 ANKRD61A6NGH8 418 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 M0R135 149 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 CASKO14936 926 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 GATBO75879 557 aaKnown RBP12.58□□□□□ -0.4
COL9A1-207ENST00000486080 IL1AP01583 271 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 ACSM4P0C7M7 580 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 COX5AP20674 150 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 SLC6A9P48067 706 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 RAB1AP62820 205 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 ECH1Q13011 328 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 LSAMPQ13449 338 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 GABRA6Q16445 453 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 DGUOKQ16854 277 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 EIF2S3LQ2VIR3 472 aaKnown RBP12.58□□□□□ -0.4
COL9A1-207ENST00000486080 OR8B12Q8NGG6 310 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 SPTSSAQ969W0 71 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 ZNF799Q96GE5 643 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 WACQ9BTA9 647 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 MED18Q9BUE0 208 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 SLC17A5Q9NRA2 495 aa12.58□□□□□ -0.4
COL9A1-207ENST00000486080 A0A0G2JNJ9 132 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 CIB4A0PJX0 185 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 LMX1BO60663 402 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 APEX1P27695 318 aaKnown RBP12.57□□□□□ -0.4
COL9A1-207ENST00000486080 TGFBR3Q03167 851 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 KRTAP27-1Q3LI81 207 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 PAMR1Q6UXH9 720 aa12.57□□□□□ -0.4
COL9A1-207ENST00000486080 ZNF704Q6ZNC4 412 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms