RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 HOXD4P09016 255 aaPredicted RBP8.82□□□□□ -1
HDAC6-226ENST00000483656 TMIGD3P0DMS9 266 aaPredicted RBP8.82□□□□□ -1
HDAC6-226ENST00000483656 SLC2A1P11166 492 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 TIMP3P35625 211 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 CX3CR1P49238 355 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 CAV3P56539 151 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 ZNF121P58317 390 aaPredicted RBP8.82□□□□□ -1
HDAC6-226ENST00000483656 GRB2P62993 217 aaKnown RBP8.82□□□□□ -1
HDAC6-226ENST00000483656 HGFACQ04756 655 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 MXD1Q05195 221 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 SCRN3Q0VDG4 424 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 TAF13Q15543 124 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 DGUOKQ16854 277 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 ZNF829Q3KNS6 432 aaPredicted RBP8.82□□□□□ -1
HDAC6-226ENST00000483656 ABHD12BQ7Z5M8 362 aaPredicted RBP8.82□□□□□ -1
HDAC6-226ENST00000483656 NR2C2APQ86WQ0 139 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 ELMOD2Q8IZ81 293 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 ZNF610Q8N9Z0 462 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 CPEB3Q8NE35 698 aaKnown RBP8.82□□□□□ -1
HDAC6-226ENST00000483656 OR1F12Q8NHA8 337 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 DERL3Q96Q80 235 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 ATF6BQ99941 703 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 PBOV1Q9GZY1 135 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 NOX4Q9NPH5 578 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 BRD7Q9NPI1 651 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 SLC17A5Q9NRA2 495 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 SNTG1Q9NSN8 517 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 B3GNT2Q9NY97 397 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 PLEK2Q9NYT0 353 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 NUFIP1Q9UHK0 495 aaKnown RBP8.82□□□□□ -1
HDAC6-226ENST00000483656 GTF2A1LQ9UNN4 478 aa8.82□□□□□ -1
HDAC6-226ENST00000483656 TRAV1-2A0A0B4J238 106 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 A0A0G2JK05 382 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 SMIM30A4D0T7 59 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 P2RY10O00398 339 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 PRRG2O14669 202 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 SLC19A2O60779 497 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 CLPXO76031 633 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 NCR1O76036 304 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 FARS2O95363 451 aaKnown RBP8.81□□□□□ -1
HDAC6-226ENST00000483656 CNOT4O95628 575 aaKnown RBP8.81□□□□□ -1
HDAC6-226ENST00000483656 IGLV3-1P01715 115 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 ISG15P05161 165 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 ACSM4P0C7M7 580 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 COX5AP20674 150 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 ACHEP22303 614 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 CALRP27797 417 aaKnown RBP8.81□□□□□ -1
HDAC6-226ENST00000483656 HSD11B1P28845 292 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 SOX2P48431 317 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 MTNR1BP49286 362 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 SH3BGRP55822 239 aaPredicted RBP8.81□□□□□ -1
HDAC6-226ENST00000483656 PCBD1P61457 104 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 GALK2Q01415 458 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 LY6DQ14210 128 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 GABRA6Q16445 453 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 Q499Y3 187 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 HIKESHIQ53FT3 197 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 PABPC1L2AQ5JQF8 200 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 CEP78Q5JTW2 689 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 SFRP5Q5T4F7 317 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 BCL2L15Q5TBC7 163 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 ASPHD2Q6ICH7 369 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 ZNF544Q6NX49 715 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 ANKRD16Q6P6B7 361 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 PAMR1Q6UXH9 720 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 Q6ZT83 130 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 GABRG1Q8N1C3 465 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 ZNF433Q8N7K0 673 aaPredicted RBP8.81□□□□□ -1
HDAC6-226ENST00000483656 ZNF283Q8N7M2 679 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 OR8B12Q8NGG6 310 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 GPR148Q8TDV2 347 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 PHYHIPQ92561 330 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 SLC25A46Q96AG3 418 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 ZNF75AQ96N20 296 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 GFI1Q99684 422 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 SOX7Q9BT81 388 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 COMMD4Q9H0A8 199 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 HDHD2Q9H0R4 259 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 OPN3Q9H1Y3 402 aaPredicted RBP8.81□□□□□ -1
HDAC6-226ENST00000483656 KCNN2Q9H2S1 579 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 TP63Q9H3D4 680 aaPredicted RBP8.81□□□□□ -1
HDAC6-226ENST00000483656 TPK1Q9H3S4 243 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 PLEKHB1Q9UF11 243 aaPredicted RBP8.81□□□□□ -1
HDAC6-226ENST00000483656 NBEAQ8NFP9 2946 aa8.81□□□□□ -1
HDAC6-226ENST00000483656 HELZ2Q9BYK8 2649 aaKnown RBP8.8□□□□□ -1
HDAC6-226ENST00000483656 LOC100509620A0A075B734 347 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 LOC107986453A0A1B0GWG9 222 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 ANKRD61A6NGH8 418 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 F5H5K5 113 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 CASKO14936 926 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 LMX1BO60663 402 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 INHBBP09529 407 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 EDN3P14138 238 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 PAX7P23759 505 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 RORCP51449 518 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 PER3P56645 1201 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 OR10A3P58181 314 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 ECH1Q13011 328 aa8.8□□□□□ -1
HDAC6-226ENST00000483656 HNRNPA0Q13151 305 aaKnown RBP8.8□□□□□ -1
HDAC6-226ENST00000483656 TSC22D1Q15714 1073 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms