RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SUCLG1P53597 346 aaKnown RBP10.84□□□□□ -0.67
PTPRF-212ENST00000477970 CLDN6P56747 220 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 MLF1P58340 268 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 C19orf57Q0VDD7 668 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 CHAF1BQ13112 559 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 Q6ZTK2 550 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 UTS2BQ765I0 119 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 NLRC3Q7RTR2 1065 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 TMEM165Q9HC07 324 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 PROK2Q9HC23 129 aa10.84□□□□□ -0.67
PTPRF-212ENST00000477970 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
PTPRF-212ENST00000477970 TLX3O43711 291 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-212ENST00000477970 ERCC1P07992 297 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-212ENST00000477970 PTHLHP12272 177 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF43P17038 809 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 RAD52P43351 418 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 QRFPP83859 136 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 RSPO4Q2I0M5 234 aaPredicted RBP10.83□□□□□ -0.68
PTPRF-212ENST00000477970 OR11H4Q8NGC9 324 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 MR1Q95460 341 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 SEH1LQ96EE3 360 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 EMC6Q9BV81 110 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 TMEM138Q9NPI0 162 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 PTRH2Q9Y3E5 179 aaKnown RBP10.83□□□□□ -0.68
PTPRF-212ENST00000477970 FREM3P0C091 2139 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 A0A1B0GTI1 187 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 P2RY10O00398 339 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 KDM4BO94953 1096 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 PER3P56645 1201 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 GRB2P62993 217 aaKnown RBP10.83□□□□□ -0.68
PTPRF-212ENST00000477970 CFAP77Q6ZQR2 320 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 Q6ZSR3 168 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 SLC22A24Q8N4F4 322 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 OR1M1Q8NGA1 313 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 OR51A2Q8NGJ7 313 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 OR2AJ1Q8NGZ0 328 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 AQP3Q92482 292 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 INTS12Q96CB8 462 aaKnown RBP10.83□□□□□ -0.68
PTPRF-212ENST00000477970 DMDP11532 3685 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 OR2M5A3KFT3 312 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 ANKRD34BA5PLL1 514 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 ITGB2P05107 769 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 DNASE1P24855 282 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 RAP2BP61225 183 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 ZMYND11Q15326 602 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 ZBTB37Q5TC79 503 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 PIP4P1Q86T03 277 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 UXS1Q8NBZ7 420 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 CCDC54Q8NEL0 328 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 BEST4Q8NFU0 473 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 B3GNT2Q9NY97 397 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 UPB1Q9UBR1 384 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 SLC5A6Q9Y289 635 aa10.83□□□□□ -0.68
PTPRF-212ENST00000477970 MYO15AQ9UKN7 3530 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 A0A1W2PPL8 197 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 PATE3B3GLJ2 98 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF814B7Z6K7 855 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 SULT2B1O00204 365 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 RAD1O60671 282 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 IGLV3-1P01715 115 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 GABREP78334 506 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 INPP5JQ15735 1006 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-212ENST00000477970 MPPED2Q15777 294 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 STEAP1BQ6NZ63 245 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 CORO6Q6QEF8 472 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 PGAP1Q75T13 922 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 OR2W3Q7Z3T1 314 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 GABRG1Q8N1C3 465 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 OR5D14Q8NGL3 314 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 SLC25A21Q9BQT8 299 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-212ENST00000477970 HEXA-AS1Q9H8Q6 139 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 CENPMQ9NSP4 180 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 SLC2A8Q9NY64 477 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 NKIRAS2Q9NYR9 191 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 PIPOXQ9P0Z9 390 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 KIAA1549Q9HCM3 1950 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 A0A1W2PNR3 127 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF726A6NNF4 738 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 SYT7O43581 403 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 RGS11O94810 467 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 FOLR3P41439 243 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 SELENOPP49908 381 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 HIST1H3AP68431 136 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 PMPCAQ10713 525 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 TMEM176BQ3YBM2 270 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-212ENST00000477970 HIST2H3PS2Q5TEC6 136 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 HIST2H3AQ71DI3 136 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 OR1J2Q8NGS2 313 aa10.82□□□□□ -0.68
PTPRF-212ENST00000477970 NAA11Q9BSU3 229 aaPredicted RBP10.82□□□□□ -0.68
PTPRF-212ENST00000477970 LOC101059948A0A1B0GTJ6 334 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 METTL21EPA6NDL7 271 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 PYCARD-AS1I3L0S3 204 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 GTF2F2P13984 249 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 ID4P47928 161 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 GNG2P59768 71 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 TCEAL6Q6IPX3 200 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 TCEAL3Q969E4 200 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 SGCZQ96LD1 299 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 GINS4Q9BRT9 223 aa10.81□□□□□ -0.68
PTPRF-212ENST00000477970 ZPBPQ9BS86 351 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms