RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 DNAH7Q8WXX0 4024 aa5.56□□□□□ -1.52
CLDN4-205ENST00000476494 SMIM31A0A1B0GVY4 71 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 TMEM129A0AVI4 362 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 FAM183AA6NL82 134 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ZNF716A6NP11 495 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ZNF724A8MTY0 619 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 J3QRE1 110 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 M0R129 80 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 PHYHO14832 338 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 TRAF3IP2O43734 574 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 KHDRBS3O75525 346 aaKnown RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 TRMUO75648 421 aaKnown RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 PLGP00747 810 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 IGHA1P01876 353 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 MT-ND2P03891 347 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 RNASE1P07998 156 aaKnown RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 SBK2P0C263 348 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 OR2T7P0C7T2 308 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ATP6V1B1P15313 513 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 GSTT1P30711 240 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 GUCA1AP43080 201 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ALDH3B2P48448 385 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 BIDP55957 195 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 CLRN1P58418 232 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 EMX1Q04741 257 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 GLO1Q04760 184 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 SPOCK1Q08629 439 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 RASGEF1BQ0VAM2 473 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 IRF3Q14653 427 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 STK11Q15831 433 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 FAM189A2Q15884 450 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 HIST3H3Q16695 136 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 KLHL12Q53G59 568 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 SYT6Q5T7P8 510 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 UBE2UQ5VVX9 321 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ABLIM2Q6H8Q1 611 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ZNF544Q6NX49 715 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 TMPRSS11AQ6ZMR5 421 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 FCRLAQ7L513 359 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 C1QL2Q7Z5L3 287 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 KCTD20Q7Z5Y7 419 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 GLCCI1Q86VQ1 547 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 UBQLNLQ8IYU4 475 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 KDM8Q8N371 416 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ACBD7Q8N6N7 88 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 CYB561A3Q8NBI2 242 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 OR52I1Q8NGK6 324 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 OR2T27Q8NH04 317 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 TMEM45BQ96B21 275 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 RASD2Q96D21 266 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 RBMXL1Q96E39 390 aaKnown RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 GMPPAQ96IJ6 420 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 DUX5Q96PT3 197 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 CNN2Q99439 309 aaKnown RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 MND1Q9BWT6 205 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 TMPRSS13Q9BYE2 586 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 SRXN1Q9BYN0 137 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 PRRG4Q9BZD6 226 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 YIPF3Q9GZM5 350 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 FAM192AQ9GZU8 254 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 SYT4Q9H2B2 425 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 MARCH7Q9H992 704 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 SRA1Q9HD15 236 aaKnown RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ISYNA1Q9NPH2 558 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ACOT13Q9NPJ3 140 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 B3GAT2Q9NPZ5 323 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 RPRD1BQ9NQG5 326 aaKnown RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 PAK1IP1Q9NWT1 392 aaPredicted RBP5.55□□□□□ -1.52
CLDN4-205ENST00000476494 ASB6Q9NWX5 421 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 KCNG2Q9UJ96 466 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 B9D1Q9UPM9 204 aa5.55□□□□□ -1.52
CLDN4-205ENST00000476494 DAPL1A0PJW8 107 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 CCDC182A6NF36 153 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 DNAJC9-AS1A6NH13 148 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 A6NHS1 94 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 ZNF99A8MXY4 864 aaPredicted RBP5.54□□□□□ -1.52
CLDN4-205ENST00000476494 ZNF814B7Z6K7 855 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 TIMM23O14925 209 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 MYL12BO14950 172 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 SLC16A7O60669 478 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 SLC43A1O75387 559 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 SERPINI2O75830 405 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 SEC14L2O76054 403 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 YES1P07947 543 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 HTR1AP08908 422 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 PGA4P0DJD7 388 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 PGA3P0DJD8 388 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 HLA-DOBP13765 273 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 C21orf33P30042 268 aaPredicted RBP5.54□□□□□ -1.52
CLDN4-205ENST00000476494 CSNK1A1P48729 337 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 FABP6P51161 128 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 ZNF133P52736 654 aaPredicted RBP5.54□□□□□ -1.52
CLDN4-205ENST00000476494 CLDN17P56750 224 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 ACTA2P62736 377 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 ACTG2P63267 376 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 MRPL28Q13084 256 aaKnown RBP5.54□□□□□ -1.52
CLDN4-205ENST00000476494 GALEQ14376 348 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 SPHARQ15513 63 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 KCNMB1Q16558 191 aa5.54□□□□□ -1.52
CLDN4-205ENST00000476494 TEX30Q5JUR7 227 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms