RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 NOS3P29474 1203 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 GGT2P36268 569 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 MMP16P51512 607 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL1A1-203ENST00000471344 FBXW12Q6X9E4 464 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 OR4M2Q8NGB6 313 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 OR4C15Q8NGM1 316 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 GNPDA2Q8TDQ7 276 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 PTP4A1Q93096 173 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 CLPTM1LQ96KA5 538 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 GCM1Q9NP62 436 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 MMP26Q9NRE1 261 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 IL19Q9UHD0 177 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 PPP1R3CQ9UQK1 317 aa12.93□□□□□ -0.34
COL1A1-203ENST00000471344 C5orf63A6NC05 138 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 TVP23AA6NH52 213 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 F5H5K5 113 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 TNFRSF11BO00300 401 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 BHLHE40O14503 412 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 HLA-DQA2P01906 255 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 ACSM4P0C7M7 580 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 TUBG1P23258 451 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 TNFSF4P23510 183 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 RGS6P49758 472 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 MNAT1P51948 309 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 BTG1P62324 171 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 HOXA4Q00056 320 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-203ENST00000471344 SLC3A1Q07837 685 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 ZNF770Q6IQ21 691 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-203ENST00000471344 C1QL2Q7Z5L3 287 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 PEG10Q86TG7 708 aaKnown RBP12.92□□□□□ -0.34
COL1A1-203ENST00000471344 ATG16L2Q8NAA4 619 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 OR51L1Q8NGJ5 315 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 OR10S1Q8NGN2 331 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 APOBEC3DQ96AK3 386 aaPredicted RBP12.92□□□□□ -0.34
COL1A1-203ENST00000471344 MAP6Q96JE9 813 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 MEGF10Q96KG7 1140 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 PITX2Q99697 317 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 SLC6A7Q99884 636 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 TUBG2Q9NRH3 451 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 TAS2R1Q9NYW7 299 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 ACTR3BQ9P1U1 418 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 CYB5R1Q9UHQ9 305 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 CDH10Q9Y6N8 788 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 NBEAL1Q6ZS30 2694 aa12.92□□□□□ -0.34
COL1A1-203ENST00000471344 F5H5P2 479 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 TRAPPC2LH3BP13 241 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 SOX14O95416 240 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 CYB5R3P00387 301 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-203ENST00000471344 FSHBP01225 129 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 GASTP01350 101 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 HLA-DPB1P04440 258 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 TNFRSF1AP19438 455 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 CALB2P22676 271 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 IFNGR2P38484 337 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 MAGEA2P43356 314 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 MS4A2Q01362 244 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 TRAP1Q12931 704 aaKnown RBP12.91□□□□□ -0.34
COL1A1-203ENST00000471344 FAM201AQ5SY85 155 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 ZNF362Q5T0B9 420 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-203ENST00000471344 PGM2L1Q6PCE3 622 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 COLCA1Q6ZS62 124 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 OR8G5Q8NG78 346 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 OR9Q1Q8NGQ5 310 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 ST7LQ8TDW4 575 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 C22orf15Q8WYQ4 148 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 SLC7A6OSQ96CW6 309 aaPredicted RBP12.91□□□□□ -0.34
COL1A1-203ENST00000471344 COG8Q96MW5 612 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 DDOQ99489 341 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 ATF6BQ99941 703 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 C1QTNF5Q9BXJ0 243 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 C7orf69Q9H7B7 122 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 U3KQV3 271 aa12.91□□□□□ -0.34
COL1A1-203ENST00000471344 IQCF6A8MYZ5 107 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 F5H0A9 414 aaPredicted RBP12.9□□□□□ -0.34
COL1A1-203ENST00000471344 TMEM178BH3BS89 294 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 J3QW42 95 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 GYPBP06028 91 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 PMELP40967 661 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 HMGA2P52926 109 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 GK2Q14410 553 aaPredicted RBP12.9□□□□□ -0.34
COL1A1-203ENST00000471344 MOGAT3Q86VF5 341 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 LRRC28Q86X40 367 aaPredicted RBP12.9□□□□□ -0.34
COL1A1-203ENST00000471344 AQP11Q8NBQ7 271 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 DEFB108BQ8NET1 73 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 PROKR2Q8NFJ6 384 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 OR4Q3Q8NH05 313 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 ZNF582Q96NG8 517 aaPredicted RBP12.9□□□□□ -0.34
COL1A1-203ENST00000471344 SLC30A2Q9BRI3 323 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 CDADC1Q9BWV3 514 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 PATZ1Q9HBE1 687 aaKnown RBP12.9□□□□□ -0.34
COL1A1-203ENST00000471344 ARMC1Q9NVT9 282 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 PCDHB10Q9UN67 800 aa12.9□□□□□ -0.34
COL1A1-203ENST00000471344 CEACAM18A8MTB9 384 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 J3QLI3 93 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 IDH3BO43837 385 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 KRT36O76013 467 aa12.89□□□□□ -0.35
COL1A1-203ENST00000471344 CCNB2O95067 398 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms