RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 GTF3AQ92664 365 aaKnown RBP12.41□□□□□ -0.42
COMMD3-206ENST00000468179 SLC7A6OSQ96CW6 309 aaPredicted RBP12.41□□□□□ -0.42
COMMD3-206ENST00000468179 ZNF582Q96NG8 517 aaPredicted RBP12.41□□□□□ -0.42
COMMD3-206ENST00000468179 MSL2Q9HCI7 577 aa12.41□□□□□ -0.42
COMMD3-206ENST00000468179 ARMC1Q9NVT9 282 aa12.41□□□□□ -0.42
COMMD3-206ENST00000468179 PDP1Q9P0J1 537 aaPredicted RBP12.41□□□□□ -0.42
COMMD3-206ENST00000468179 NAV3Q8IVL0 2385 aa12.41□□□□□ -0.42
COMMD3-206ENST00000468179 F5H5K5 113 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 IFNL4K9M1U5 179 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 GSC2O15499 205 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 ANXA8P13928 327 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 PAICSP22234 425 aaKnown RBP12.4□□□□□ -0.42
COMMD3-206ENST00000468179 IGFBP5P24593 272 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 IL2RGP31785 369 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 GRK5P34947 590 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 THBS2P35442 1172 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 MVKQ03426 396 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 BNIP1Q12981 228 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 CRMP1Q14194 572 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 ZNF362Q5T0B9 420 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-206ENST00000468179 CFAP77Q6ZQR2 320 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 COLCA1Q6ZS62 124 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 OR8G5Q8NG78 346 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 OR2Z1Q8NG97 314 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 OR13G1Q8NGZ3 307 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 OR51F2Q8NH61 342 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 DNAJC9Q8WXX5 260 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 NIPSNAP1Q9BPW8 284 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 RBM4Q9BWF3 364 aaKnown RBP12.4□□□□□ -0.42
COMMD3-206ENST00000468179 C1QTNF5Q9BXJ0 243 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 MMADHCQ9H3L0 296 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-206ENST00000468179 NARFLQ9H6Q4 476 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 CMC2Q9NRP2 79 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 MRPL22Q9NWU5 206 aaKnown RBP12.4□□□□□ -0.42
COMMD3-206ENST00000468179 TREM2Q9NZC2 230 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 PTTG3PQ9NZH4 202 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 DNAJB9Q9UBS3 223 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 IL19Q9UHD0 177 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 TMEFF2Q9UIK5 374 aaPredicted RBP12.4□□□□□ -0.42
COMMD3-206ENST00000468179 POMPQ9Y244 141 aa12.4□□□□□ -0.42
COMMD3-206ENST00000468179 TCRBV3S1A0A5B6 114 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 KIAA1324LA8MWY0 1029 aaPredicted RBP12.39□□□□□ -0.43
COMMD3-206ENST00000468179 FKBP6O75344 327 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 LCATP04180 440 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 HMGN1P05114 100 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 ACSM4P0C7M7 580 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 SPI1P17947 270 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 ENTPD1P49961 510 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 CBX1P83916 185 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 TAF13Q15543 124 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 CR1LQ2VPA4 569 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 KRTAP27-1Q3LI81 207 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 TMEM255AQ5JRV8 349 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 TEX30Q5JUR7 227 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 ACSM5Q6NUN0 579 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 TEX29Q8N6K0 151 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 ATG16L2Q8NAA4 619 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 PAPD5Q8NDF8 572 aaKnown RBP12.39□□□□□ -0.43
COMMD3-206ENST00000468179 OR9Q1Q8NGQ5 310 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 OR4Q3Q8NH05 313 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 SOX7Q9BT81 388 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 NMNAT2Q9BZQ4 307 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 POFUT1Q9H488 388 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 SP140LQ9H930 580 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 NOP16Q9Y3C1 178 aaKnown RBP12.39□□□□□ -0.43
COMMD3-206ENST00000468179 WIPI2Q9Y4P8 454 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 ABCA2Q9BZC7 2435 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 RTTNQ86VV8 2226 aa12.39□□□□□ -0.43
COMMD3-206ENST00000468179 CHD3Q12873 2000 aaKnown RBP12.39□□□□□ -0.43
COMMD3-206ENST00000468179 TVP23AA6NH52 213 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 IQCF6A8MYZ5 107 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 M0R135 149 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 GPR37O15354 613 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 DEAF1O75398 565 aaPredicted RBP12.38□□□□□ -0.43
COMMD3-206ENST00000468179 MSMBP08118 114 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 OSMP13725 252 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 POU1F1P28069 291 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 SLC15A1P46059 708 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
COMMD3-206ENST00000468179 LMO4P61968 165 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 AVPI1Q5T686 147 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 OR6K6Q8NGW6 343 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 NRBF2Q96F24 287 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 ZNF799Q96GE5 643 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 ZNF665Q9H7R5 613 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 DDX28Q9NUL7 540 aaKnown RBP12.38□□□□□ -0.43
COMMD3-206ENST00000468179 COMMD3-BMI1R4GMX3 469 aa12.38□□□□□ -0.43
COMMD3-206ENST00000468179 TRAV20A0A0B4J274 112 aa12.37□□□□□ -0.43
COMMD3-206ENST00000468179 ZNF593O00488 134 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-206ENST00000468179 APOC1P02654 83 aa12.37□□□□□ -0.43
COMMD3-206ENST00000468179 SPARCP09486 303 aa12.37□□□□□ -0.43
COMMD3-206ENST00000468179 SRP14P37108 136 aaKnown RBP12.37□□□□□ -0.43
COMMD3-206ENST00000468179 SLC6A9P48067 706 aa12.37□□□□□ -0.43
COMMD3-206ENST00000468179 SCGB2A2Q13296 93 aa12.37□□□□□ -0.43
COMMD3-206ENST00000468179 HLXQ14774 488 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-206ENST00000468179 PCK2Q16822 640 aa12.37□□□□□ -0.43
COMMD3-206ENST00000468179 RSPO1Q2MKA7 263 aaPredicted RBP12.37□□□□□ -0.43
COMMD3-206ENST00000468179 OR2T2Q6IF00 324 aa12.37□□□□□ -0.43
COMMD3-206ENST00000468179 DRAM2Q6UX65 266 aa12.37□□□□□ -0.43
COMMD3-206ENST00000468179 Q6ZR03 302 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms