RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TGM6O95932 706 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 TACSTD2P09758 323 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 H2AFB2P0C5Z0 115 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 PGA4P0DJD7 388 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 PGA3P0DJD8 388 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 SRMP19623 302 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 AP3S2P59780 193 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 MRPS10P82664 201 aaKnown RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 RASGEF1BQ0VAM2 473 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 PDSS1Q5T2R2 415 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 RPUSD3Q6P087 351 aaKnown RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 DTX3Q8N9I9 347 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 NSMAFQ92636 917 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 SLC25A44Q96H78 314 aaPredicted RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 ZFP3Q96NJ6 502 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 MNTQ99583 582 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 TTTY10Q9BZA0 68 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 PLSCR2Q9NRY7 297 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 COPS3Q9UNS2 423 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 FLVCR1Q9Y5Y0 555 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 FREM3P0C091 2139 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 TRAV6A0A075B6T7 132 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 AIPO00170 330 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 FABP7O15540 132 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 CYTIPO60759 359 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 GIFP27352 417 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 MAPK3P27361 379 aaPredicted RBP16.44■□□□□ 0.22
CAPN3-209ENST00000466222 CENPAP49450 140 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 PRR30Q53SZ7 412 aaPredicted RBP16.44■□□□□ 0.22
CAPN3-209ENST00000466222 PHYHD1Q5SRE7 291 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 SLC16A9Q7RTY1 509 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 OR6X1Q8NH79 312 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 LGALS14Q8TCE9 139 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 SNAPC3Q92966 411 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 GPR137Q96N19 417 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 WDR76Q9H967 626 aa16.44■□□□□ 0.22
CAPN3-209ENST00000466222 COA3Q9Y2R0 106 aaPredicted RBP16.44■□□□□ 0.22
CAPN3-209ENST00000466222 AK6Q9Y3D8 172 aaKnown RBP16.44■□□□□ 0.22
CAPN3-209ENST00000466222 ZNF407Q9C0G0 2248 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 IGLV1-36A0A0B4J1U3 117 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 A6NIZ1 184 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 ZNF726A6NNF4 738 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 PRAF2O60831 178 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 RAP1BP61224 184 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 RAP1AP62834 184 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 SNTB2Q13425 540 aaKnown RBP16.43■□□□□ 0.22
CAPN3-209ENST00000466222 POU4F3Q15319 338 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 MEP1BQ16820 701 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 ZNF684Q5T5D7 378 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 FAM220AQ7Z4H9 259 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 OR2T4Q8NH00 348 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 RNF128Q8TEB7 428 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 PNPLA2Q96AD5 504 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 NOX4Q9NPH5 578 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 ARPC4-TTLL3A0A0A6YYG9 625 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 IFITM5A6NNB3 132 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 AQP7O14520 342 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 MAGEB4O15481 346 aaPredicted RBP16.43■□□□□ 0.22
CAPN3-209ENST00000466222 CALCBP10092 127 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 CLRN1P58418 232 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 GSG1Q2KHT4 349 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 LRFN4Q6PJG9 635 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 TUSC5Q8IXB3 177 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 KDF1Q8NAX2 398 aaPredicted RBP16.43■□□□□ 0.22
CAPN3-209ENST00000466222 OR11H7Q8NGC8 314 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 ZNF431Q8TF32 576 aaPredicted RBP16.43■□□□□ 0.22
CAPN3-209ENST00000466222 RAB40AQ8WXH6 277 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 SF3B5Q9BWJ5 86 aaKnown RBP16.43■□□□□ 0.22
CAPN3-209ENST00000466222 PRRG4Q9BZD6 226 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 PRDM14Q9GZV8 571 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 SLITRK2Q9H156 845 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 PRORYQ9H606 182 aa16.43■□□□□ 0.22
CAPN3-209ENST00000466222 MRPS7Q9Y2R9 242 aaKnown RBP16.43■□□□□ 0.22
CAPN3-209ENST00000466222 A0A1W2PPK0 400 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 HSPB2A8KAH6 182 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 GABARAPH6UMI1 98 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 AKR7A2O43488 359 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 ZNF432O94892 652 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 SYNGR4O95473 234 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 IGHG1P01857 330 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 MNDAP41218 407 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 HSPB2Q16082 182 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 ELFN2Q5R3F8 820 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 CHMP1BQ7LBR1 199 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 CMTM4Q8IZR5 234 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 TMEM123Q8N131 208 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 NOXO1Q8NFA2 376 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 DERL3Q96Q80 235 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 PDCD1LG2Q9BQ51 273 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 B3GNT2Q9NY97 397 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 ZNF222Q9UK12 451 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 MCTS1Q9ULC4 181 aaKnown RBP16.42■□□□□ 0.22
CAPN3-209ENST00000466222 ETV7Q9Y603 341 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 V9GY05 133 aa16.42■□□□□ 0.22
CAPN3-209ENST00000466222 TLN1Q9Y490 2541 aaKnown RBP16.42■□□□□ 0.22
CAPN3-209ENST00000466222 SMLR1H3BR10 107 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 ERVH48-1M5A8F1 160 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 SULT1A3P0DMM9 295 aa16.41■□□□□ 0.22
CAPN3-209ENST00000466222 SULT1A4P0DMN0 295 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms