RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CLPSP04118 112 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 APODP05090 189 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 GLAP06280 429 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 PET100P0DJ07 73 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 HPGDP15428 266 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 RCC1P18754 421 aaPredicted RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 ABCD3P28288 659 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 GDI1P31150 447 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 GALNSP34059 522 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 CTNNB1P35222 781 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SULT1A2P50226 295 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SNRPEP62304 92 aaKnown RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 BTG2P78543 158 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 INSM1Q01101 510 aaPredicted RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 RUNX3Q13761 415 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SMCO1Q147U7 214 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 SGCBQ16585 318 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 HYAL4Q2M3T9 481 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 TMEM128Q5BJH2 165 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 FAM209BQ5JX69 171 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 VAX1Q5SQQ9 334 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 OR52W1Q6IF63 320 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 BTNL8Q6UX41 500 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 MDGA2Q7Z553 956 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ARRDC1Q8N5I2 433 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 GATSQ8NAP1 163 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 CCL4L1Q8NHW4 92 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 METTL21AQ8WXB1 218 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 ELF4Q99607 663 aaPredicted RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 SLC5A7Q9GZV3 580 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 LAT2Q9GZY6 243 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 TUBA4BQ9H853 241 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 G6PC2Q9NQR9 355 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 PARP11Q9NR21 331 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 PRTFDC1Q9NRG1 225 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 GSN-AS1Q9NRJ2 163 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 METTL1Q9UBP6 276 aaKnown RBP6.53□□□□□ -1.36
USP48-206ENST00000464577 OR52A1Q9UKL2 312 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 PCDHGA1Q9Y5H4 931 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 CLDN16Q9Y5I7 305 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 TIMM10BQ9Y5J6 103 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 KPTNQ9Y664 436 aa6.53□□□□□ -1.36
USP48-206ENST00000464577 LOC100509620A0A075B734 347 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 POM121BA6NF01 834 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 MSGN1A6NI15 193 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 K7EQS6 105 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 TNFRSF10CO14798 259 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 SLC31A1O15431 190 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 KCNAB3O43448 404 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 SSX5O60225 188 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 SLC16A7O60669 478 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 EIF1BO60739 113 aaKnown RBP6.52□□□□□ -1.37
USP48-206ENST00000464577 UTS2O95399 124 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 CSTBP04080 98 aaKnown RBP6.52□□□□□ -1.37
USP48-206ENST00000464577 FCGR3AP08637 254 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 ACRP10323 421 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 AGAP20933 346 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 EIF1P41567 113 aaKnown RBP6.52□□□□□ -1.37
USP48-206ENST00000464577 SEC13P55735 322 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 UNC119Q13432 240 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 ACKR1Q16570 336 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 EIF2S3LQ2VIR3 472 aaKnown RBP6.52□□□□□ -1.37
USP48-206ENST00000464577 PRTGQ2VWP7 1150 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 NSUN5P2Q63ZY6 315 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 CBLN3Q6UW01 205 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 TMPPEQ6ZT21 453 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 MED25Q71SY5 747 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 ZNF561Q8N587 486 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 GVQW1Q8N7I0 195 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 CHST4Q8NCG5 386 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 TERB2Q8NHR7 220 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 ZNF563Q8TA94 476 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 MARCH1Q8TCQ1 289 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 HIST1H2BAQ96A08 127 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 TMEM230Q96A57 120 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 ZNF775Q96BV0 537 aaPredicted RBP6.52□□□□□ -1.37
USP48-206ENST00000464577 ARL5BQ96KC2 179 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 SCGB3A2Q96PL1 93 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 TAAR9Q96RI9 348 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 OR51M1Q9H341 326 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 TXNIPQ9H3M7 391 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 HRH4Q9H3N8 390 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 SLC22A11Q9NSA0 550 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 STARD5Q9NSY2 213 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 CACFD1Q9UGQ2 172 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 GPR132Q9UNW8 380 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 FLVCR1Q9Y5Y0 555 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 DOCK9Q9BZ29 2069 aa6.52□□□□□ -1.37
USP48-206ENST00000464577 CLDN4O14493 209 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 ICOSLGO75144 302 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 MED6O75586 246 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 MT-ND4LP03901 98 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 ZNF806P0C7X5 589 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 CTLA4P16410 223 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 FCARP24071 287 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 FPR2P25090 351 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 S100PP25815 95 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 CRABP1P29762 137 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 LPAR6P43657 344 aa6.51□□□□□ -1.37
USP48-206ENST00000464577 CSNK1EP49674 416 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms