RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 NIPAL2Q9H841 368 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 SNTG1Q9NSN8 517 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 ZNF319Q9P2F9 582 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 PROCRQ9UNN8 238 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 SHANK1Q9Y566 2161 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 TRBV5-5A0A0J9YX44 114 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 C5orf63A6NC05 138 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 OR6C6A6NF89 314 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 ERVH48-1M5A8F1 160 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 PIN1P1O15428 100 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 LYZL6O75951 148 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 SERPINA3P01011 423 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 TTRP02766 147 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 CRHP06850 196 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 SFTPCP11686 197 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 CRYGSP22914 178 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 SH3BGRP55822 239 aaPredicted RBP13.48□□□□□ -0.25
GYPC-205ENST00000464053 PMPCAQ10713 525 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 SLC36A2Q495M3 483 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 PABPC1L2AQ5JQF8 200 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 SFRP5Q5T4F7 317 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 BCL2L15Q5TBC7 163 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 ANKRD16Q6P6B7 361 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 PRSS45Q7RTY3 260 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 CPEB3Q8NE35 698 aaKnown RBP13.48□□□□□ -0.25
GYPC-205ENST00000464053 TSC22D3Q99576 134 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 SLIRPQ9GZT3 109 aaKnown RBP13.48□□□□□ -0.25
GYPC-205ENST00000464053 HDHD2Q9H0R4 259 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 TPK1Q9H3S4 243 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 RNF121Q9H920 327 aa13.48□□□□□ -0.25
GYPC-205ENST00000464053 ZNF879B4DU55 563 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 E9PLN8 166 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 RAD51DO75771 328 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 CNOT4O95628 575 aaKnown RBP13.47□□□□□ -0.25
GYPC-205ENST00000464053 OCM2P0CE71 109 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 CD79AP11912 226 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 OTX1P32242 354 aaPredicted RBP13.47□□□□□ -0.25
GYPC-205ENST00000464053 SOX2P48431 317 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 CAV3P56539 151 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 HGFACQ04756 655 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 TBRG1Q3YBR2 411 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 ZNF544Q6NX49 715 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 ELMOD2Q8IZ81 293 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 GABRG1Q8N1C3 465 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 ZNF433Q8N7K0 673 aaPredicted RBP13.47□□□□□ -0.25
GYPC-205ENST00000464053 OR8B12Q8NGG6 310 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 BARHL1Q9BZE3 327 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 SLC24A3Q9HC58 644 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 NOX4Q9NPH5 578 aa13.47□□□□□ -0.25
GYPC-205ENST00000464053 P2RY10O00398 339 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 GATBO75879 557 aaKnown RBP13.46□□□□□ -0.25
GYPC-205ENST00000464053 UCHL1P09936 223 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 LSAMPQ13449 338 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 DGUOKQ16854 277 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 Q499Y3 187 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 FAM57BQ71RH2 274 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 ZFP3Q96NJ6 502 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 DERL3Q96Q80 235 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 WACQ9BTA9 647 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 MED18Q9BUE0 208 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 SLC17A5Q9NRA2 495 aa13.46□□□□□ -0.25
GYPC-205ENST00000464053 NUFIP1Q9UHK0 495 aaKnown RBP13.46□□□□□ -0.25
GYPC-205ENST00000464053 A0A0G2JNJ9 132 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 LOC107986453A0A1B0GWG9 222 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 ANKRD61A6NGH8 418 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 M0R135 149 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 NCR1O76036 304 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 IL1AP01583 271 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 ANXA2P07355 339 aaKnown RBP13.46□□□□□ -0.26
GYPC-205ENST00000464053 ACSM4P0C7M7 580 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 COX5AP20674 150 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 HTR5AP47898 357 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 SLC6A9P48067 706 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 RAB1AP62820 205 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 RBPJQ06330 500 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 GABRA6Q16445 453 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 EIF2S3LQ2VIR3 472 aaKnown RBP13.46□□□□□ -0.26
GYPC-205ENST00000464053 NR2C2APQ86WQ0 139 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 GPR148Q8TDV2 347 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 SPTSSAQ969W0 71 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 ZNF799Q96GE5 643 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 B3GNT2Q9NY97 397 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 Q9UFV3 132 aa13.46□□□□□ -0.26
GYPC-205ENST00000464053 USP24Q9UPU5 2620 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 A0A1W2PR80 420 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 CASKO14936 926 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 LMX1BO60663 402 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 ISG15P05161 165 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 ECH1Q13011 328 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 ZNF474Q6S9Z5 364 aaPredicted RBP13.45□□□□□ -0.26
GYPC-205ENST00000464053 ZNF704Q6ZNC4 412 aaPredicted RBP13.45□□□□□ -0.26
GYPC-205ENST00000464053 CXorf67Q86X51 503 aaPredicted RBP13.45□□□□□ -0.26
GYPC-205ENST00000464053 OR51E1Q8TCB6 317 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 SLC25A46Q96AG3 418 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 SOX7Q9BT81 388 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 MOB1AQ9H8S9 216 aa13.45□□□□□ -0.26
GYPC-205ENST00000464053 CCDC59Q9P031 241 aaKnown RBP13.45□□□□□ -0.26
GYPC-205ENST00000464053 TRBV5-7A0A0A0MS05 114 aa13.44□□□□□ -0.26
GYPC-205ENST00000464053 A0A1B0GTI1 187 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms