RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 COMMD3Q9UBI1 195 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 PRSS50Q9UI38 385 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 B3GALT5Q9Y2C3 310 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 TACC2O95359 2948 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 RTTNQ86VV8 2226 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 MFSD2BA6NFX1 497 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 C19orf84I3L1E1 186 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 IGFBP1P08833 259 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-203ENST00000449575 DNASE1P24855 282 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 CHRNB4P30926 498 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 TGM4P49221 684 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 SELENOPP49908 381 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 SLC16A1P53985 500 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 CRISP1P54107 249 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 POU3F1Q03052 451 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-203ENST00000449575 LGALSLQ3ZCW2 172 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-203ENST00000449575 TMEM201Q5SNT2 666 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 ZNF474Q6S9Z5 364 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-203ENST00000449575 THSD4Q6ZMP0 1018 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 TMPRSS11FQ6ZWK6 438 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 MS4A15Q8N5U1 240 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 LIPHQ8WWY8 451 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 NIPSNAP1Q9BPW8 284 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 ISYNA1Q9NPH2 558 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 ZNF629Q9UEG4 869 aaPredicted RBP8.69□□□□□ -1.02
CCDC171-203ENST00000449575 SCP2D1Q9UJQ7 156 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 COPS3Q9UNS2 423 aa8.69□□□□□ -1.02
CCDC171-203ENST00000449575 PRSS44E7EML9 344 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 CLDN1O95832 211 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 CLEC2LP0C7M8 214 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 CLDN17P56750 224 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 RPS4XP62701 263 aaKnown RBP8.68□□□□□ -1.02
CCDC171-203ENST00000449575 MELKQ14680 651 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 TUSC1Q2TAM9 212 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 LIPKQ5VXJ0 399 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 C22orf42Q6IC83 251 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 OAFQ86UD1 273 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 AQP11Q8NBQ7 271 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 FANK1Q8TC84 345 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 GTPBP3Q969Y2 492 aaKnown RBP8.68□□□□□ -1.02
CCDC171-203ENST00000449575 LINC00052Q96N35 136 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 ZFP3Q96NJ6 502 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 OXGR1Q96P68 337 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 KATNB1Q9BVA0 655 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 SFXN3Q9BWM7 321 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 HDHD2Q9H0R4 259 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 OR51J1Q9H342 316 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 GHITMQ9H3K2 345 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 NUBP2Q9Y5Y2 271 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 ANKHD1Q8IWZ3 2542 aaKnown RBP8.68□□□□□ -1.02
CCDC171-203ENST00000449575 MCIDASD6RGH6 385 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 ABCD4O14678 606 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 RNF13O43567 381 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 MPC2O95563 127 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 IGF2P01344 180 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 TP53P04637 393 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-203ENST00000449575 IFNGR1P15260 489 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 ZNF43P17038 809 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 SMSP52788 366 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 SMIM11AP58511 58 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 TFF3Q07654 80 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 PLA1AQ53H76 456 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 C1orf94Q6P1W5 598 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 ZNF808Q8N4W9 903 aaPredicted RBP8.68□□□□□ -1.02
CCDC171-203ENST00000449575 LRRC75AQ8NAA5 344 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 CLRN3Q8NCR9 226 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 OR11H7Q8NGC8 314 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 OR2T4Q8NH00 348 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 ACOT12Q8WYK0 555 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 OTULINQ96BN8 352 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 RBM14Q96PK6 669 aaKnown RBP8.68□□□□□ -1.02
CCDC171-203ENST00000449575 DPAGT1Q9H3H5 408 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 B3GAT2Q9NPZ5 323 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 JKAMPQ9P055 326 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 COPZ2Q9P299 210 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 RASD1Q9Y272 281 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 SIGLEC7Q9Y286 467 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 HIF3AQ9Y2N7 669 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 ADAM18Q9Y3Q7 739 aa8.68□□□□□ -1.02
CCDC171-203ENST00000449575 MEIKINA0A087WXM9 373 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 IRGMA1A4Y4 181 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ZNF724A8MTY0 619 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 DVL2O14641 736 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 SULT1B1O43704 296 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ENTPD6O75354 484 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 APOL3O95236 402 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 HIST1H2ABP04908 130 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ADRA2AP08913 450 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 GAAP10253 952 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 FGF9P31371 208 aaPredicted RBP8.67□□□□□ -1.02
CCDC171-203ENST00000449575 OPRM1P35372 400 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 PHYHD1Q5SRE7 291 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 BCL2L15Q5TBC7 163 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 MTFR2Q6P444 385 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 CASP12Q6UXS9 341 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 RASSF6Q6ZTQ3 369 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 HIST3H2AQ7L7L0 130 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 LINGO2Q7L985 606 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 UXS1Q8NBZ7 420 aa8.67□□□□□ -1.02
CCDC171-203ENST00000449575 ADPRHL1Q8NDY3 354 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms