RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 Q499Y3 187 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 IDNKQ5T6J7 187 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 SFXN4Q6P4A7 337 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 CREB3L2Q70SY1 520 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 KRT77Q7Z794 578 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 LRRC28Q86X40 367 aaPredicted RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 POC5Q8NA72 575 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 SLC26A10Q8NG04 563 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 OR2G2Q8NGZ5 317 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 PDCD1LG2Q9BQ51 273 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 SF3B5Q9BWJ5 86 aaKnown RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 SRRQ9GZT4 340 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 ELOVL3Q9HB03 270 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 GP6Q9HCN6 339 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 MRPL22Q9NWU5 206 aaKnown RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 EMC3Q9P0I2 261 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 RABL2AQ9UBK7 228 aaPredicted RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 PROCRQ9UNN8 238 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 RABL2BQ9UNT1 228 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 KLHDC2Q9Y2U9 406 aa13.74□□□□□ -0.21
SHOX2-202ENST00000425436 NOSIPQ9Y314 301 aaKnown RBP13.74□□□□□ -0.21
SHOX2-202ENST00000425436 CACNA1CQ13936 2221 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 RPP14O95059 124 aaKnown RBP13.73□□□□□ -0.21
SHOX2-202ENST00000425436 SRMP19623 302 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 TALDO1P37837 337 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 RIDAP52758 137 aaKnown RBP13.73□□□□□ -0.21
SHOX2-202ENST00000425436 CAV3P56539 151 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 CLRN1P58418 232 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 SCN1BQ07699 218 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 RIN1Q13671 783 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 EIF2B1Q14232 305 aaKnown RBP13.73□□□□□ -0.21
SHOX2-202ENST00000425436 POU4F3Q15319 338 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 MEP1BQ16820 701 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 OR8H2Q8N162 312 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 OR10H5Q8NGA6 315 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 OR6K3Q8NGY3 331 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 GPR148Q8TDV2 347 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 TXNDC15Q96J42 360 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 MAP6Q96JE9 813 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 SOSTQ9BQB4 213 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 PPIL3Q9H2H8 161 aaKnown RBP13.73□□□□□ -0.21
SHOX2-202ENST00000425436 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 PLSCR4Q9NRQ2 329 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 MED29Q9NX70 200 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 SLCO1C1Q9NYB5 712 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 FRRS1LQ9P0K9 344 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 ALPK2Q86TB3 2170 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 ADGRG4Q8IZF6 3080 aa13.73□□□□□ -0.21
SHOX2-202ENST00000425436 DOPEY1Q5JWR5 2465 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 GPR171O14626 319 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 MRPL33O75394 65 aaKnown RBP13.72□□□□□ -0.21
SHOX2-202ENST00000425436 IGHV3-9P01782 118 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 LAP3P28838 519 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 CLDN17P56750 224 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 NANOS3P60323 173 aaKnown RBP13.72□□□□□ -0.21
SHOX2-202ENST00000425436 SLC25A35Q3KQZ1 300 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 RHOUQ7L0Q8 258 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF676Q8N7Q3 588 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 OR52N5Q8NH56 324 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 RNF166Q96A37 237 aaPredicted RBP13.72□□□□□ -0.21
SHOX2-202ENST00000425436 SDHCQ99643 169 aaPredicted RBP13.72□□□□□ -0.21
SHOX2-202ENST00000425436 PIGMQ9H3S5 423 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 JKAMPQ9P055 326 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 PRSS50Q9UI38 385 aa13.72□□□□□ -0.21
SHOX2-202ENST00000425436 HCFC1P51610 2035 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 hCG_2014768A0A024R1R8 64 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 TRBV5-5A0A0J9YX44 114 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 OR4C45A6NMZ5 311 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 A8MXE2 369 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 PRR32B1ATL7 298 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 PSMD9O00233 223 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 TRAF3IP2O43734 574 aaPredicted RBP13.71□□□□□ -0.21
SHOX2-202ENST00000425436 NCR1O76036 304 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 PGA4P0DJD7 388 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 PGA3P0DJD8 388 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 GRNP28799 593 aaKnown RBP13.71□□□□□ -0.21
SHOX2-202ENST00000425436 DCTDP32321 178 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 ETFDHQ16134 617 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 C11orf91Q3C1V1 193 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 PYDC2Q56P42 97 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF474Q6S9Z5 364 aaPredicted RBP13.71□□□□□ -0.21
SHOX2-202ENST00000425436 AAED1Q7RTV5 226 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 WDFY1Q8IWB7 410 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 ZNF100Q8IYN0 542 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 NOXO1Q8NFA2 376 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 C4orf45Q96LM5 186 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 DERL3Q96Q80 235 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 OR14A2Q96R54 314 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 ABHD6Q9BV23 337 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 EMC6Q9BV81 110 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 TCF7L1Q9HCS4 588 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 NOX4Q9NPH5 578 aa13.71□□□□□ -0.21
SHOX2-202ENST00000425436 FAM25AB3EWG3 89 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 FAM25CB3EWG5 89 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 FAM25GB3EWG6 89 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 HPGDSO60760 199 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 CLDN1O95832 211 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 EPXP11678 715 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 NPR2P20594 1047 aa13.7□□□□□ -0.22
SHOX2-202ENST00000425436 GUCA1AP43080 201 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms