RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 UCHL1P09936 223 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF12P17014 697 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF20P17024 532 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF32P17041 273 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 FSTP19883 344 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 COX5AP20674 150 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 SDC2P34741 201 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 TGFBR1P36897 503 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 RORCP51449 518 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PRKXP51817 358 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 CASP6P55212 293 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 TPTEP56180 551 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF121P58317 390 aaPredicted RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 NANOS3P60323 173 aaKnown RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 UBE2NP61088 152 aaKnown RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PPP3R1P63098 170 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ARF1P84077 181 aaKnown RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 FAPQ12884 760 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 LSAMPQ13449 338 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 GUSBP1Q15486 140 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 GFOD2Q3B7J2 385 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ACSM3Q53FZ2 586 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 CEP78Q5JTW2 689 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 DDI2Q5TDH0 399 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 C9orf135Q5VTT2 229 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 MZT2AQ6P582 158 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ANKRD16Q6P6B7 361 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PLXDC2Q6UX71 529 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF627Q7L945 461 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 LINGO2Q7L985 606 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 NUFIP2Q7Z417 695 aaKnown RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 LUZP2Q86TE4 346 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 TPRA1Q86W33 373 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PRSS35Q8N3Z0 413 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 Q8NA96 180 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 CCDC54Q8NEL0 328 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 OR10S1Q8NGN2 331 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 OR1K1Q8NGR3 316 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 RGP1Q92546 391 aaPredicted RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 TMEM106AQ96A25 262 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 SLC25A46Q96AG3 418 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PGAM5Q96HS1 289 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 CEP19Q96LK0 163 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 DACH2Q96NX9 599 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 DERL3Q96Q80 235 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 KCNJ15Q99712 375 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 KCNS3Q9BQ31 491 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 SFXN3Q9BWM7 321 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 OR2H1Q9GZK4 316 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 SLC25A18Q9H1K4 315 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 OR10A2Q9H208 303 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 MMP27Q9H306 513 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 RNF167Q9H6Y7 350 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 RNF121Q9H920 327 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 TCF7L1Q9HCS4 588 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 BRD7Q9NPI1 651 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PNRC2Q9NPJ4 139 aaKnown RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 FAM206AQ9NX38 181 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PRSS50Q9UI38 385 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 SLC5A6Q9Y289 635 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PEX16Q9Y5Y5 336 aa5.23□□□□□ -1.57
HMGB3-202ENST00000419110 SIRT4Q9Y6E7 314 aaPredicted RBP5.23□□□□□ -1.57
HMGB3-202ENST00000419110 PKD1L2Q7Z442 2459 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 A0A075B6Q4 140 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 TRAV1-2A0A0B4J238 106 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 CIB4A0PJX0 185 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SMIM30A4D0T7 59 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ANKRD61A6NGH8 418 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 MSTNO14793 375 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 RGS5O15539 181 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 LRRTM2O43300 516 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 TBX1O43435 398 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SLC19A2O60779 497 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 TMEM127O75204 238 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SRSF10O75494 262 aaKnown RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SC5DO75845 299 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 RAF1P04049 648 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ISG15P05161 165 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ERCC1P07992 297 aaPredicted RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ITGA5P08648 1049 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ACSM4P0C7M7 580 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 EDN3P14138 238 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 RAB3BP20337 219 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ARR3P36575 388 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 RANBP1P43487 201 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 MAP2K3P46734 347 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SOX2P48431 317 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 HIST1H3AP68431 136 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 GALK2Q01415 458 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 PLP2Q04941 152 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 DYNC1I2Q13409 638 aaKnown RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF846Q147U1 533 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ODF4Q2M2E3 257 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 TBRG1Q3YBR2 411 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SPANXN2Q5MJ10 180 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 FAM27D1Q5T7N8 215 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 HIST2H3PS2Q5TEC6 136 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF324BQ6AW86 544 aaPredicted RBP5.22□□□□□ -1.57
HMGB3-202ENST00000419110 ZNF774Q6NX45 483 aa5.22□□□□□ -1.57
HMGB3-202ENST00000419110 SFXN4Q6P4A7 337 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms