RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PLPP2O43688 288 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 GASTP01350 101 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF823P16415 610 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 ERFP50548 548 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 DBPQ10586 325 aaPredicted RBP11.33□□□□□ -0.6
VCX3A-202ENST00000398729 SCGB2A2Q13296 93 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 OR2T5Q6IEZ7 315 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 OR2T2Q6IF00 324 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF770Q6IQ21 691 aaPredicted RBP11.33□□□□□ -0.6
VCX3A-202ENST00000398729 SLC27A4Q6P1M0 643 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 ATG16L2Q8NAA4 619 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 PROKR2Q8NFJ6 384 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 OR8G5Q8NG78 346 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 OR4M2Q8NGB6 313 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 OR2T4Q8NH00 348 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 OR2T29Q8NH02 315 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 ITLN1Q8WWA0 313 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 LRGUKQ96M69 825 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF582Q96NG8 517 aaPredicted RBP11.33□□□□□ -0.6
VCX3A-202ENST00000398729 OR2V2Q96R30 315 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 HCAR1Q9BXC0 346 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 METTL17Q9H7H0 456 aaPredicted RBP11.33□□□□□ -0.6
VCX3A-202ENST00000398729 G6PC2Q9NQR9 355 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 TBC1D23Q9NUY8 699 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 UBAP1Q9NZ09 502 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 PPP1R3CQ9UQK1 317 aa11.33□□□□□ -0.6
VCX3A-202ENST00000398729 SAMHD1Q9Y3Z3 626 aaKnown RBP11.33□□□□□ -0.6
VCX3A-202ENST00000398729 DYNC1I1O14576 645 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 SBK2P0C263 348 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 T-ENOLP0DO92 83 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 CFPP27918 469 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 PYCR1P32322 319 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 GGT2P36268 569 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 MS4A2Q01362 244 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 PPP1R8Q12972 351 aaKnown RBP11.32□□□□□ -0.6
VCX3A-202ENST00000398729 RSPO1Q2MKA7 263 aaPredicted RBP11.32□□□□□ -0.6
VCX3A-202ENST00000398729 KRTAP27-1Q3LI81 207 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF771Q7L3S4 317 aaPredicted RBP11.32□□□□□ -0.6
VCX3A-202ENST00000398729 LNX2Q8N448 690 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF283Q8N7M2 679 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 CYB561A3Q8NBI2 242 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 OR8D4Q8NGM9 314 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 OR13G1Q8NGZ3 307 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 ST7LQ8TDW4 575 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 ASB9Q96DX5 294 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 C1QTNF5Q9BXJ0 243 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 C1orf21Q9H246 121 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 OCEL1Q9H607 264 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 MRPL22Q9NWU5 206 aaKnown RBP11.32□□□□□ -0.6
VCX3A-202ENST00000398729 PCDHB10Q9UN67 800 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 BAIAP2Q9UQB8 552 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 U3KQV3 271 aa11.32□□□□□ -0.6
VCX3A-202ENST00000398729 IQCF6A8MYZ5 107 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 J3QLI3 93 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 KCNAB3O43448 404 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 SPRY1O43609 319 aaPredicted RBP11.31□□□□□ -0.6
VCX3A-202ENST00000398729 IGHV2-70P01814 119 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 LCATP04180 440 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 ACSM4P0C7M7 580 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 RAP2AP10114 183 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 SELEP16581 610 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 GATA3P23771 443 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 TPTEP56180 551 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 TRAP1Q12931 704 aaKnown RBP11.31□□□□□ -0.6
VCX3A-202ENST00000398729 MALLQ13021 153 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 MICAQ29983 383 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 ZNF362Q5T0B9 420 aaPredicted RBP11.31□□□□□ -0.6
VCX3A-202ENST00000398729 DCAF12L2Q5VW00 463 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 KLHL36Q8N4N3 616 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 SPICQ8N5J4 248 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 SLC37A3Q8NCC5 494 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 OR2T33Q8NG76 320 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 OR10AD1Q8NGE0 317 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 CCDC124Q96CT7 223 aaKnown RBP11.31□□□□□ -0.6
VCX3A-202ENST00000398729 DDOQ99489 341 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 TSSK6Q9BXA6 273 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 WDR76Q9H967 626 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 PNRC2Q9NPJ4 139 aaKnown RBP11.31□□□□□ -0.6
VCX3A-202ENST00000398729 DCAF16Q9NXF7 216 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 VNN3Q9NY84 501 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 TAS2R1Q9NYW7 299 aa11.31□□□□□ -0.6
VCX3A-202ENST00000398729 TVP23AA6NH52 213 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 IFNL4K9M1U5 179 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 FOXH1O75593 365 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 EGR1P18146 543 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 SRP9P49458 86 aaKnown RBP11.3□□□□□ -0.6
VCX3A-202ENST00000398729 BTG1P62324 171 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 LCN2P80188 198 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 HNRNPA0Q13151 305 aaKnown RBP11.3□□□□□ -0.6
VCX3A-202ENST00000398729 GK3PQ14409 553 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 TMEM155Q4W5P6 130 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 NAA40Q86UY6 237 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.3□□□□□ -0.6
VCX3A-202ENST00000398729 BHLHE23Q8NDY6 225 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 OR10G2Q8NGC3 310 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 OR9Q1Q8NGQ5 310 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 SPTSSAQ969W0 71 aa11.3□□□□□ -0.6
VCX3A-202ENST00000398729 MAP6Q96JE9 813 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms