RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 YIF1BQ5BJH7 314 aa1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 C12orf54Q6X4T0 127 aa1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 TMEM150AQ86TG1 271 aa1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 CSGALNACT2Q8N6G5 542 aa1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 TRIM44Q96DX7 344 aaPredicted RBP1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 DNAJC1Q96KC8 554 aaKnown RBP1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 LRRC40Q9H9A6 602 aa1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 PISDQ9UG56 409 aa1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 STARD10Q9Y365 291 aa1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 LOXHD1Q8IVV2 1947 aa1.79□□□□□ -2.12
RNU4-28P-201ENST00000364739 KIAA1671Q9BY89 1806 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 A0A0J9YXV3 536 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 ZNF878C9JN71 531 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 MANBAO00462 879 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 PLPP1O14494 284 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 EIF4E2O60573 245 aaKnown RBP1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 FKBP6O75344 327 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 KLHL2O95198 593 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 ATF6P18850 670 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 PSMB5P28074 263 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 NAA10P41227 235 aaPredicted RBP1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 ACTR1AP61163 376 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 NCF4Q15080 339 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 PPM1LQ5SGD2 360 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 HCP5Q6MZN7 132 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 C16orf47Q6ZP98 133 aaPredicted RBP1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 MRPL55Q7Z7F7 128 aaKnown RBP1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 TEX9Q8N6V9 391 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 CHST4Q8NCG5 386 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 HGDQ93099 445 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 TMEM230Q96A57 120 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 DCPSQ96C86 337 aaKnown RBP1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 KRTAP4-1Q9BYQ7 146 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 TMEM27Q9HBJ8 222 aa1.78□□□□□ -2.12
RNU4-28P-201ENST00000364739 KANK1Q14678 1352 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 IGHV1-3A0A0C4DH29 117 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 FAM240BA0A1B0GVZ2 78 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 SMKR1H3BMG3 65 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 H7C1H1 209 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 PAHP00439 452 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 LHBP01229 141 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 CMC4P56277 68 aaPredicted RBP1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 STXBP1P61764 594 aaKnown RBP1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 ANKDD1AQ495B1 522 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 PRAMEF5Q5TYX0 476 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 PRAMEF6Q5VXH4 476 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 RNASEKQ6P5S7 137 aaKnown RBP1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 PPP1R42Q7Z4L9 355 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 NBPF5PQ86XG9 351 aaPredicted RBP1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 SGPP2Q8IWX5 399 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 STK40Q8N2I9 435 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 SPATA4Q8NEY3 305 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 CPNE4Q96A23 557 aaPredicted RBP1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 ZBTB18Q99592 522 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 MARVELD1Q9BSK0 173 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 NEUROG2Q9H2A3 272 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 RHBDL2Q9NX52 303 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 PSMC3IPQ9P2W1 217 aaPredicted RBP1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 LGALS13Q9UHV8 139 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 HMCN1Q96RW7 5635 aa1.77□□□□□ -2.13
RNU4-28P-201ENST00000364739 CDC40O60508 579 aaKnown RBP eCLIP1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 SERPINA3P01011 423 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 NTF3P20783 257 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 POLR2IP36954 125 aaKnown RBP1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 PRPHP41219 470 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 TAF7Q15545 349 aaPredicted RBP1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 KLHL12Q53G59 568 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 CENPPQ6IPU0 288 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 LINC00336Q6ZUF6 198 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 RUFY3Q7L099 469 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 OR52E2Q8NGJ4 325 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 TM2D3Q9BRN9 247 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 GCOM2Q9BZD3 368 aaPredicted RBP1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 LINC00574Q9H8X3 128 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 HRASLS2Q9NWW9 162 aa1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 UXTQ9UBK9 157 aaPredicted RBP1.76□□□□□ -2.13
RNU4-28P-201ENST00000364739 AKNAQ7Z591 1439 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 USP47Q96K76 1375 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 MUC6Q6W4X9 2439 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 MFNGO00587 321 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 AIM2O14862 343 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 PLIN3O60664 434 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 SERPINB7O75635 380 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 ARG1P05089 322 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 CD28P10747 220 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 TNNI1P19237 187 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 PSMD8P48556 350 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 RPL23AP62750 156 aaKnown RBP1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 SIGLEC14Q08ET2 396 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 ZMYND11Q15326 602 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 UBE2UQ5VVX9 321 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 MED27Q6P2C8 311 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 TBPL2Q6SJ96 375 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 NPSR1Q6W5P4 371 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 RGS9BPQ6ZS82 235 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 CMTM1Q8IZ96 169 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 UBE2J2Q8N2K1 259 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 GPATCH11Q8N954 259 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 OR4M1Q8NGD0 313 aa1.75□□□□□ -2.13
RNU4-28P-201ENST00000364739 OR1J4Q8NGS1 313 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms