RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 SYNDIG1Q9H7V2 258 aa2.37□□□□□ -2.03
RNU6-28P-201ENST00000362378 SLC39A1Q9NY26 324 aa2.37□□□□□ -2.03
RNU6-28P-201ENST00000362378 MTFP1Q9UDX5 166 aa2.37□□□□□ -2.03
RNU6-28P-201ENST00000362378 TRMT112Q9UI30 125 aaKnown RBP2.37□□□□□ -2.03
RNU6-28P-201ENST00000362378 TNIKQ9UKE5 1360 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 ARHGAP21Q5T5U3 1957 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 ADAMTS13Q76LX8 1427 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 TRAV6A0A075B6T7 132 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 IGHV5-10-1A0A0J9YXX1 117 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 OR6C74A6NCV1 312 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 SLC22A20A6NK97 555 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 PLPP1O14494 284 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 RDH16O75452 317 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 HSBP1O75506 76 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 SLC25A14O95258 325 aaPredicted RBP2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 TDP2O95551 362 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 PGA5P0DJD9 388 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF823P16415 610 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 IL32P24001 234 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 PFN2P35080 140 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 LONP1P36776 959 aaKnown RBP2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 SERPINB8P50452 374 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 BCAP31P51572 246 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 RPS23P62266 143 aaKnown RBP2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 ART3Q13508 389 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 WDR43Q15061 677 aaKnown RBP eCLIP2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 IRF4Q15306 451 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 GABRA6Q16445 453 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 GCSAMLQ5JQS6 135 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 AVPI1Q5T686 147 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 ADNP2Q6IQ32 1131 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 ULK3Q6PHR2 472 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 LINC00336Q6ZUF6 198 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 ENTHD1Q8IYW4 607 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 SAXO1Q8IYX7 474 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 METTL13Q8N6R0 699 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 COX18Q8N8Q8 333 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 OR5T3Q8NGG3 340 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 LRRC29Q8WV35 223 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 RGP1Q92546 391 aaPredicted RBP2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 KIAA1143Q96AT1 154 aaPredicted RBP2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 APH1AQ96BI3 265 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 DCPSQ96C86 337 aaKnown RBP2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 TM4SF18Q96CE8 201 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 SPNS1Q9H2V7 528 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 FBXO44Q9H4M3 255 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 PATZ1Q9HBE1 687 aaKnown RBP2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 CTSFQ9UBX1 484 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 RAB26Q9ULW5 256 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 PALLDQ8WX93 1383 aa2.36□□□□□ -2.03
RNU6-28P-201ENST00000362378 IGHV3OR16-9A0A0B4J2B5 98 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 A0A0J9YYE9 177 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 A0A1B0GUH1 482 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 A0A1W2PPV4 95 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 PDZK1P1A8MUH7 402 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 H7C1H1 209 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 GABRPO00591 440 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 SNAI2O43623 268 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 SPAG7O75391 227 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 SEMA3DO95025 777 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 TRBC1P01850 177 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 HOXC4P09017 264 aaPredicted RBP2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 PGA4P0DJD7 388 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 PGA3P0DJD8 388 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 GFAPP14136 432 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 RAB5AP20339 215 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 BMI1P35226 326 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 SSTR5P35346 364 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 SYNJ2BPP57105 145 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 RAP1AP62834 184 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 C5orf64Q2M2E5 130 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 RWDD4Q6NW29 188 aaKnown RBP2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF547Q8IVP9 402 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 SLC34A3Q8N130 599 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 ARRDC1Q8N5I2 433 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 SNX31Q8N9S9 440 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 OR11H7Q8NGC8 314 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 OR10W1Q8NGF6 305 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 OR5AR1Q8NGP9 310 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 PIFOQ8TCI5 191 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 PIH1D2Q8WWB5 315 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF75CPQ92670 426 aaPredicted RBP2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 RAB1CQ92928 201 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 ISOC2Q96AB3 205 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 AGMATQ9BSE5 352 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 EDA2RQ9HAV5 297 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 HMG20AQ9NP66 347 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 MED4Q9NPJ6 270 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 DYRK4Q9NR20 520 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 MCUBQ9NWR8 336 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 ZNF223Q9UK11 482 aaPredicted RBP2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 DDX19BQ9UMR2 479 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 COMMD3-BMI1R4GMX3 469 aa2.35□□□□□ -2.03
RNU6-28P-201ENST00000362378 GPATCH8Q9UKJ3 1502 aaKnown RBP2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 ARPC4-TTLL3A0A0A6YYG9 625 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 A0A0J9YXV3 536 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 A0A0U1RQV1 116 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 SYCE1LA8MT33 242 aa2.34□□□□□ -2.03
RNU6-28P-201ENST00000362378 ANKRD65E5RJM6 399 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms