RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ATPIF1Q9UII2 106 aa8.4□□□□□ -1.06
NPHP1-202ENST00000355301 TINAGQ9UJW2 476 aa8.4□□□□□ -1.06
NPHP1-202ENST00000355301 GTF2A1LQ9UNN4 478 aa8.4□□□□□ -1.06
NPHP1-202ENST00000355301 PROCRQ9UNN8 238 aa8.4□□□□□ -1.06
NPHP1-202ENST00000355301 KALRNO60229 2985 aa8.4□□□□□ -1.07
NPHP1-202ENST00000355301 SMG1Q96Q15 3661 aaKnown RBP8.4□□□□□ -1.07
NPHP1-202ENST00000355301 ACACBO00763 2458 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ACOD1A6NK06 481 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ZNF879B4DU55 563 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ARL6IP5O75915 188 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 CDRT1O95170 752 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 TTRP02766 147 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 OCM2P0CE71 109 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 UBCP0CG48 685 aaKnown RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 MAPK3P27361 379 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 CALRP27797 417 aaKnown RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 PRKXP51817 358 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ZNF121P58317 390 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ODF4Q2M2E3 257 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 KRTAP27-1Q3LI81 207 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 FAM27D1Q5T7N8 215 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ZNF283Q8N7M2 679 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 C1orf162Q8NEQ5 155 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 AKR7LQ8NHP1 331 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 THRSPQ92748 146 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 SPTSSAQ969W0 71 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 SLC25A46Q96AG3 418 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 WBP1Q96G27 269 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 DERL3Q96Q80 235 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 SLC17A5Q9NRA2 495 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 CCDC59Q9P031 241 aaKnown RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ZGRF1Q86YA3 2104 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 INTS1Q8N201 2190 aaKnown RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 TRAV1-2A0A0B4J238 106 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 SHISA3A0PJX4 238 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ZNF503-AS2A6NEH8 195 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 F5H5K5 113 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 M0R135 149 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 UBL3O95164 117 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 HLA-HP01893 362 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 RAF1P04049 648 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ARR3P36575 388 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 MTNR1BP49286 362 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 LSAMPQ13449 338 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 P2RY6Q15077 328 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 GABRA6Q16445 453 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 TBRG1Q3YBR2 411 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 HIKESHIQ53FT3 197 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 PABPC1L2AQ5JQF8 200 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 TMEM244Q5VVB8 128 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 BEND4Q6ZU67 534 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 CCDC36Q8IYA8 594 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ZNF433Q8N7K0 673 aaPredicted RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ZNF610Q8N9Z0 462 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ST6GALNAC3Q8NDV1 305 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 CPEB3Q8NE35 698 aaKnown RBP8.39□□□□□ -1.07
NPHP1-202ENST00000355301 OR51A4Q8NGJ6 313 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 OR10AC1Q8NH08 325 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 SLC7A6Q92536 515 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 ZNF799Q96GE5 643 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 RNF121Q9H920 327 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 BRD7Q9NPI1 651 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 SNTG1Q9NSN8 517 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 B3GNT2Q9NY97 397 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 HHLA2Q9UM44 414 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 PMF1-BGLAPU3KQ54 211 aa8.39□□□□□ -1.07
NPHP1-202ENST00000355301 SPTA1P02549 2419 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 ATRXP46100 2492 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 CASKO14936 926 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 PIN1P1O15428 100 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 LYZL6O75951 148 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 CLPXO76031 633 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 DBHP09172 617 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 ACSM4P0C7M7 580 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 COX5BP10606 129 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 SLC2A1P11166 492 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 HOXB1P14653 301 aaPredicted RBP8.38□□□□□ -1.07
NPHP1-202ENST00000355301 ACHEP22303 614 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 OPRM1P35372 400 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 SOX6P35712 828 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 MAGEB1P43366 347 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 HTR5AP47898 357 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 TPTEP56180 551 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 RAB1AP62820 205 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 MXD1Q05195 221 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 PMPCAQ10713 525 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 HSD17B12Q53GQ0 312 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 DRAM2Q6UX65 266 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 NAA40Q86UY6 237 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 TPRA1Q86W33 373 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 OR8B12Q8NGG6 310 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 ASB5Q8WWX0 329 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 NANOS1Q8WY41 292 aaKnown RBP8.38□□□□□ -1.07
NPHP1-202ENST00000355301 TMEM106AQ96A25 262 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 NXF2Q9GZY0 626 aaKnown RBP8.38□□□□□ -1.07
NPHP1-202ENST00000355301 OPN3Q9H1Y3 402 aaPredicted RBP8.38□□□□□ -1.07
NPHP1-202ENST00000355301 TPK1Q9H3S4 243 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 NOX3Q9HBY0 568 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 SLC24A3Q9HC58 644 aa8.38□□□□□ -1.07
NPHP1-202ENST00000355301 NOX4Q9NPH5 578 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms