RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 SP140LQ9H930 580 aa13.54□□□□□ -0.24
MRPL55-202ENST00000336300 PNRC2Q9NPJ4 139 aaKnown RBP13.54□□□□□ -0.24
MRPL55-202ENST00000336300 IMPAD1Q9NX62 359 aa13.54□□□□□ -0.24
MRPL55-202ENST00000336300 MYEF2Q9P2K5 600 aaKnown RBP13.54□□□□□ -0.24
MRPL55-202ENST00000336300 CELSR1Q9NYQ6 3014 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 ANKRD65E5RJM6 399 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 TIMM8AO60220 97 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-202ENST00000336300 LYNP07948 512 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 ACSM4P0C7M7 580 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 NAT2P11245 290 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 SLC2A5P22732 501 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 POLR2IP36954 125 aaKnown RBP13.53□□□□□ -0.24
MRPL55-202ENST00000336300 PDLIM4P50479 330 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 MAD2L1BPQ15013 274 aaPredicted RBP13.53□□□□□ -0.24
MRPL55-202ENST00000336300 DRAM2Q6UX65 266 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 SLC16A9Q7RTY1 509 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 ZCCHC24Q8N2G6 241 aaKnown RBP13.53□□□□□ -0.24
MRPL55-202ENST00000336300 OTOSQ8NHW6 89 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 ST7LQ8TDW4 575 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 FAM168AQ92567 244 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 CMBLQ96DG6 245 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 ABHD6Q9BV23 337 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 C1QTNF5Q9BXJ0 243 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 YIPF3Q9GZM5 350 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 TPK1Q9H3S4 243 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 LAMP5Q9UJQ1 280 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 TMEM14AQ9Y6G1 99 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 RTTNQ86VV8 2226 aa13.53□□□□□ -0.24
MRPL55-202ENST00000336300 ERICH4A6NGS2 130 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 C17orf100A8MU93 164 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 SELENOFO60613 162 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 H2BFMP0C1H6 154 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 DAOP14920 347 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 RAC2P15153 192 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 SELEP16581 610 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 MPV17P39210 176 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 NAA10P41227 235 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-202ENST00000336300 ZNF81P51508 661 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 EFNB1P98172 346 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 PSG7Q13046 419 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 TNK1Q13470 666 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 CARTPTQ16568 116 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 RSPO1Q2MKA7 263 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-202ENST00000336300 KRTAP27-1Q3LI81 207 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 ZIK1Q3SY52 487 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-202ENST00000336300 KCTD18Q6PI47 426 aaPredicted RBP13.52□□□□□ -0.25
MRPL55-202ENST00000336300 SPATC1Q76KD6 591 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 ZNF525Q8N782 197 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 ZNF283Q8N7M2 679 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 ZNF540Q8NDQ6 660 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 FAM81AQ8TBF8 368 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 UBASH3BQ8TF42 649 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 RFKQ969G6 155 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 HAVCR1Q96D42 359 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 C18orf12Q96KH6 178 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 DIRC2Q96SL1 478 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 C8orf4Q9NR00 106 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 DECR2Q9NUI1 292 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 PTTG3PQ9NZH4 202 aa13.52□□□□□ -0.25
MRPL55-202ENST00000336300 LOC390937A0A1W2PQ73 354 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 TRIM64A6NGJ6 449 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 TRIM64BA6NI03 449 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 SNTNA6NMZ2 147 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 NDUFS8O00217 210 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 TPD52L2O43399 206 aaKnown RBP13.51□□□□□ -0.25
MRPL55-202ENST00000336300 ANPEPP15144 967 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 SLC25A16P16260 332 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 KITLGP21583 273 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 PRKXP51817 358 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 RCN1Q15293 331 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 TRIP10Q15642 601 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 AADACL4Q5VUY2 407 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 FBXW12Q6X9E4 464 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 COLCA1Q6ZS62 124 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 OR10S1Q8NGN2 331 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 RNF133Q8WVZ7 376 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 HRASLS5Q96KN8 279 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 ZNF582Q96NG8 517 aaPredicted RBP13.51□□□□□ -0.25
MRPL55-202ENST00000336300 CNN2Q99439 309 aaKnown RBP13.51□□□□□ -0.25
MRPL55-202ENST00000336300 MNTQ99583 582 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 PIMREGQ9BSJ6 248 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 NKIRAS2Q9NYR9 191 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 WARS2Q9UGM6 360 aaKnown RBP13.51□□□□□ -0.25
MRPL55-202ENST00000336300 PURGQ9UJV8 347 aaKnown RBP13.51□□□□□ -0.25
MRPL55-202ENST00000336300 ZDHHC8Q9ULC8 765 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 GMPPBQ9Y5P6 360 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 ARFGEF3Q5TH69 2177 aa13.51□□□□□ -0.25
MRPL55-202ENST00000336300 H7C1Q1 480 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 M0R129 80 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 PHYHO14832 338 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 LY6HO94772 140 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 MRPL3P09001 348 aaKnown RBP13.5□□□□□ -0.25
MRPL55-202ENST00000336300 TNFSF4P23510 183 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 OTX1P32242 354 aaPredicted RBP13.5□□□□□ -0.25
MRPL55-202ENST00000336300 ATP6V1E1P36543 226 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 POU4F2Q12837 409 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 TMED1Q13445 227 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 FAM209AQ5JX71 171 aa13.5□□□□□ -0.25
MRPL55-202ENST00000336300 DNM1P46Q6ZS02 220 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms