RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 HHLA2Q9UM44 414 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 A6NCN8 305 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 RAB27BO00194 218 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 SCDO00767 359 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 LINC01565O15544 149 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 PNLIPRP3Q17RR3 467 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.94□□□□□ -0.34
SNX20-202ENST00000330943 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 RBMS3Q6XE24 437 aaKnown RBP12.94□□□□□ -0.34
SNX20-202ENST00000330943 LURAP1LQ8IV03 231 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 SKA3Q8IX90 412 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 LINC00469Q8N7U9 141 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 C8orf44Q96CB5 159 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 PRSS37A4D1T9 235 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 MEGF11A6BM72 1044 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 ZNF264O43296 627 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 NUDT21O43809 227 aaKnown RBP12.93□□□□□ -0.34
SNX20-202ENST00000330943 PMP2P02689 132 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 SFTA3P0C7M3 94 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 ROM1Q03395 351 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 GPM6BQ13491 265 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 HABP2Q14520 560 aaPredicted RBP12.93□□□□□ -0.34
SNX20-202ENST00000330943 FAM209BQ5JX69 171 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 FNDC7Q5VTL7 733 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 FAHD2BQ6P2I3 314 aaPredicted RBP12.93□□□□□ -0.34
SNX20-202ENST00000330943 SLC29A4Q7RTT9 530 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 FAM160A2Q8N612 972 aaPredicted RBP12.93□□□□□ -0.34
SNX20-202ENST00000330943 FAHD2AQ96GK7 314 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 WDR92Q96MX6 357 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 PLA2G2FQ9BZM2 168 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 PRTFDC1Q9NRG1 225 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 UBQLN4Q9NRR5 601 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 DBX1A6NMT0 343 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 COLCA2A8K830 154 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 AGPAT2O15120 278 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 FABP1P07148 127 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 RNH1P13489 461 aaKnown RBP12.93□□□□□ -0.34
SNX20-202ENST00000330943 ST6GAL1P15907 406 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 CTLA4P16410 223 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 GNB3P16520 340 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 NFATC4Q14934 902 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 ELAVL1Q15717 326 aaKnown RBP12.93□□□□□ -0.34
SNX20-202ENST00000330943 ACKR1Q16570 336 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 SGCAQ16586 387 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 RTN4RL2Q86UN3 420 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 FRMD1Q8N878 549 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 NUBPLQ8TB37 319 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 NMES1Q9C002 83 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 PRR13Q9NZ81 148 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 FREM3P0C091 2139 aa12.93□□□□□ -0.34
SNX20-202ENST00000330943 TRBV6-7A0A0A0MS04 114 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 ICOSLGO75144 302 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 APODP05090 189 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 INSM1Q01101 510 aaPredicted RBP12.92□□□□□ -0.34
SNX20-202ENST00000330943 FBXO46Q6PJ61 603 aaPredicted RBP12.92□□□□□ -0.34
SNX20-202ENST00000330943 ELSPBP1Q96BH3 223 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 CNTD2Q9H8S5 307 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 OR5AC2Q9NZP5 309 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 TRAV20A0A0B4J274 112 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 C17orf51A8MQB3 221 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 ADAP1O75689 374 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 MPZL1O95297 269 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 S100A9P06702 114 aaKnown RBP12.92□□□□□ -0.34
SNX20-202ENST00000330943 MPZP25189 248 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 CX3CR1P49238 355 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 CAV2P51636 162 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 POLR2GP62487 172 aaKnown RBP eCLIP12.92□□□□□ -0.34
SNX20-202ENST00000330943 C1orf100Q5SVJ3 147 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 DRAM2Q6UX65 266 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 ETV3LQ6ZN32 361 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 TWSG1Q9GZX9 223 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 RAB22AQ9UL26 194 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 CXCR1P25024 350 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 AKR1C3P42330 323 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 CYCSP99999 105 aaKnown RBP12.92□□□□□ -0.34
SNX20-202ENST00000330943 ZP2Q05996 745 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 UNC119Q13432 240 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 SLC9A3R2Q15599 337 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 MISPQ8IVT2 679 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 METTL27Q8N6F8 245 aaPredicted RBP12.92□□□□□ -0.34
SNX20-202ENST00000330943 OR52N5Q8NH56 324 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 C14orf79Q96F83 325 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 PCDHGA1Q9Y5H4 931 aa12.92□□□□□ -0.34
SNX20-202ENST00000330943 SEC16AO15027 2179 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 IGLV1-36A0A0B4J1U3 117 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 RNASEK-C17orf49H0YIS7 233 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 RAB6AP20340 208 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 F2RL1P55085 397 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 RPL27P61353 136 aaKnown RBP12.91□□□□□ -0.34
SNX20-202ENST00000330943 SMCO1Q147U7 214 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 ZNF615Q8N8J6 731 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 OR6S1Q8NH40 331 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 PTX4Q96A99 478 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 DOCK8Q8NF50 2099 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 LOC101059948A0A1B0GTJ6 334 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 EPOPA6NHQ4 379 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 P2RY10O00398 339 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 MBTPS2O43462 519 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 UTS2O95399 124 aa12.91□□□□□ -0.34
SNX20-202ENST00000330943 BGLAPP02818 100 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms