RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 RPRMLQ8N4K4 120 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF676Q8N7Q3 588 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 GJC3Q8NFK1 279 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 WNT2BQ93097 391 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 SLC25A46Q96AG3 418 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 DERL3Q96Q80 235 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 KCNN2Q9H2S1 579 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 BRD7Q9NPI1 651 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 DDX28Q9NUL7 540 aaKnown RBP6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF224Q9NZL3 707 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 MALT1Q9UDY8 824 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 OR52A1Q9UKL2 312 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 SLC5A6Q9Y289 635 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 FAM215AQ9Y5M1 114 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 ATMQ13315 3056 aa6.1□□□□□ -1.43
PTCD2-201ENST00000308077 BOD1L1Q8NFC6 3051 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 TMEM269A0A1B0GVZ9 245 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF879B4DU55 563 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 LOC110117498-PIK3R3F6TDL0 507 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 CASKO14936 926 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 GATBO75879 557 aaKnown RBP6.09□□□□□ -1.43
PTCD2-201ENST00000308077 SERPINA3P01011 423 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 TPOP07202 933 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 ITGA5P08648 1049 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 MMP7P09237 267 aaPredicted RBP6.09□□□□□ -1.43
PTCD2-201ENST00000308077 BMP4P12644 408 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF32P17041 273 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 HSD11B1P28845 292 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 KIR2DL2P43627 348 aaPredicted RBP6.09□□□□□ -1.43
PTCD2-201ENST00000308077 MMP16P51512 607 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 PRKXP51817 358 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 PSMA6P60900 246 aaKnown RBP6.09□□□□□ -1.43
PTCD2-201ENST00000308077 FOXF2Q12947 444 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF829Q3KNS6 432 aaPredicted RBP6.09□□□□□ -1.43
PTCD2-201ENST00000308077 NRN1LQ496H8 165 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 KRTCAP3Q53RY4 240 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 ELFN2Q5R3F8 820 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 VWA1Q6PCB0 445 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 TFAP2EQ6VUC0 442 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 FAM214BQ7L5A3 538 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 ZNF627Q7L945 461 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 SYT9Q86SS6 491 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 CD163Q86VB7 1156 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 UBE2J2Q8N2K1 259 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 MFSD4AQ8N468 514 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 TEX19Q8NA77 164 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 OR6Q1Q8NGQ2 317 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 MCFD2Q8NI22 146 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 SLC7A6Q92536 515 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 ATF6BQ99941 703 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 KCNS3Q9BQ31 491 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 SLX1AQ9BQ83 275 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 COMMD4Q9H0A8 199 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 WNT5BQ9H1J7 359 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 NOX4Q9NPH5 578 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 GLRX2Q9NS18 164 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 UPB1Q9UBR1 384 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 PLEKHB1Q9UF11 243 aaPredicted RBP6.09□□□□□ -1.43
PTCD2-201ENST00000308077 TUBD1Q9UJT1 453 aa6.09□□□□□ -1.43
PTCD2-201ENST00000308077 RTTNQ86VV8 2226 aa6.09□□□□□ -1.44
PTCD2-201ENST00000308077 CCDC168Q8NDH2 2452 aa6.09□□□□□ -1.44
PTCD2-201ENST00000308077 A0A096LPE4 126 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 TRBV5-7A0A0A0MS05 114 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 A0A0G2JK05 382 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 A0A1W2PPZ6 126 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 C5orf63A6NC05 138 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MBD3L4A6NDZ8 208 aaPredicted RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MBD3L3A6NE82 208 aaPredicted RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF503-AS2A6NEH8 195 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MBD3L5A6NJ08 208 aaPredicted RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 E9PLN8 166 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SYNGR3O43761 229 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 TOXO94900 526 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 IL18BPO95998 194 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 TTRP02766 147 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 DBHP09172 617 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SLC2A1P11166 492 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 CRYGSP22914 178 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 CTSSP25774 331 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 OTX1P32242 354 aaPredicted RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SOX6P35712 828 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SOX2P48431 317 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 CX3CR1P49238 355 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MTNR1BP49286 362 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 RORCP51449 518 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SH3BGRP55822 239 aaPredicted RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 OR10A3P58181 314 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF121P58317 390 aaPredicted RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 GRB2P62993 217 aaKnown RBP6.08□□□□□ -1.44
PTCD2-201ENST00000308077 RAB35Q15286 201 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 TAF13Q15543 124 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 Q499Y3 187 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 FBXW9Q5XUX1 488 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 ZNF774Q6NX45 483 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SLC16A14Q7RTX9 510 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 PRSS45Q7RTY3 260 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 NAA40Q86UY6 237 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 SNX29P2Q8IUI4 249 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 AKR7LQ8NHP1 331 aa6.08□□□□□ -1.44
PTCD2-201ENST00000308077 MBD3L2Q8NHZ7 208 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms