RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ZNF254O75437 659 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 S100A5P33763 92 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 SORDQ00796 357 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 ZMAT1Q5H9K5 638 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 VWA1Q6PCB0 445 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 LRRN1Q6UXK5 716 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 KRT77Q7Z794 578 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 CROCCP3Q8IVE0 287 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 MFSD4AQ8N468 514 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 OR2G2Q8NGZ5 317 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 STARD4Q96DR4 205 aa21.57■■□□□ 1.04
SSBP4-201ENST00000270061 HRNRQ86YZ3 2850 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-201ENST00000270061 TUBAL3A6NHL2 446 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 A8MXE2 369 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 MSTNO14793 375 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 ZFPL1O95159 310 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 BMP4P12644 408 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 KIR2DL2P43627 348 aaPredicted RBP21.56■■□□□ 1.04
SSBP4-201ENST00000270061 CCR9P51686 369 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 HNRNPA0Q13151 305 aaKnown RBP21.56■■□□□ 1.04
SSBP4-201ENST00000270061 FOXL2NBQ6ZUU3 175 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 DCXRQ7Z4W1 244 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 TMEM200AQ86VY9 491 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 TPRA1Q86W33 373 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 C20orf196Q8IYI0 205 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 OR6N1Q8NGY5 312 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 ROBO4Q8WZ75 1007 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 HSD17B8Q92506 261 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 PPIL3Q9H2H8 161 aaKnown RBP21.56■■□□□ 1.04
SSBP4-201ENST00000270061 A0A1W2PPL8 197 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 SYNGR4O95473 234 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 CALRP27797 417 aaKnown RBP21.56■■□□□ 1.04
SSBP4-201ENST00000270061 RIDAP52758 137 aaKnown RBP21.56■■□□□ 1.04
SSBP4-201ENST00000270061 RASGEF1BQ0VAM2 473 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 FCRLAQ7L513 359 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 RNF133Q8WVZ7 376 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 PALMDQ9NP74 551 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 UGT2A1Q9Y4X1 527 aa21.56■■□□□ 1.04
SSBP4-201ENST00000270061 ARPC4-TTLL3A0A0A6YYG9 625 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 TRAV1-2A0A0B4J238 106 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 OR4C45A6NMZ5 311 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 UCHL1P09936 223 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 OR13C5Q8NGS8 318 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 OR5AK2Q8NH90 309 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 FAM222BQ8WU58 562 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 AP3S1Q92572 193 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 KCNS3Q9BQ31 491 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 SMURF1Q9HCE7 757 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 POLE4Q9NR33 117 aa21.55■■□□□ 1.04
SSBP4-201ENST00000270061 TMEM212A6NML5 194 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 ARL6IP5O75915 188 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 CFL1P23528 166 aaKnown RBP21.54■■□□□ 1.04
SSBP4-201ENST00000270061 MYL9P24844 172 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 ETV6P41212 452 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 SELENOPP49908 381 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 RHOUQ7L0Q8 258 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 BTLAQ7Z6A9 289 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 C4orf45Q96LM5 186 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 SEC61A2Q9H9S3 476 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 LRP12Q9Y561 859 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 AKAP9Q99996 3911 aa21.54■■□□□ 1.04
SSBP4-201ENST00000270061 IGKV3D-15A0A087WSY6 115 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 LSM6P62312 80 aaKnown RBP21.53■■□□□ 1.04
SSBP4-201ENST00000270061 PHYHD1Q5SRE7 291 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 ZNF544Q6NX49 715 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 FAM214BQ7L5A3 538 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 LINC00346Q8IVM7 164 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 PRSS35Q8N3Z0 413 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 TMEM45BQ96B21 275 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 C1orf198Q9H425 327 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 SLC43A1O75387 559 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 DCTDP32321 178 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 GUSBP1Q15486 140 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 FAM27D1Q5T7N8 215 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 LINC01560Q8TB33 94 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 RGP1Q92546 391 aaPredicted RBP21.53■■□□□ 1.04
SSBP4-201ENST00000270061 GMPPAQ96IJ6 420 aaPredicted RBP21.53■■□□□ 1.04
SSBP4-201ENST00000270061 COMMD4Q9H0A8 199 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 EMC9Q9Y3B6 208 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 LHFPL6Q9Y693 200 aa21.53■■□□□ 1.04
SSBP4-201ENST00000270061 ZNF879B4DU55 563 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 CTDSP2O14595 271 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 DHHO43323 396 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 SRSF10O75494 262 aaKnown RBP21.52■■□□□ 1.04
SSBP4-201ENST00000270061 CTAG2O75638 210 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 WNT11O96014 354 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 EPXP11678 715 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 CDAP32320 146 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 ZNF45Q02386 682 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 WDFY2Q96P53 400 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 OPN3Q9H1Y3 402 aaPredicted RBP21.52■■□□□ 1.04
SSBP4-201ENST00000270061 FREM1Q5H8C1 2179 aa21.52■■□□□ 1.04
SSBP4-201ENST00000270061 TRBV5-5A0A0J9YX44 114 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 GPR171O14626 319 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 NTF4P34130 210 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 GUCA1AP43080 201 aaPredicted RBP21.51■■□□□ 1.03
SSBP4-201ENST00000270061 AAED1Q7RTV5 226 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 CCDC190Q86UF4 302 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 OR14A2Q96R54 314 aa21.51■■□□□ 1.03
SSBP4-201ENST00000270061 GLRX2Q9NS18 164 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms