RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 HAAOP46952 286 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 TFF2Q03403 129 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 DOC2BQ14184 412 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 HSPB2Q16082 182 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 HES3Q5TGS1 186 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 ALKBH3Q96Q83 286 aaPredicted RBP17.17■□□□□ 0.34
SMPD3-201ENST00000219334 PLK3Q9H4B4 646 aa17.17■□□□□ 0.34
SMPD3-201ENST00000219334 BRWD1Q9NSI6 2320 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 NKX2-1P43699 371 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-201ENST00000219334 RFX2P48378 723 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 METAP1P53582 386 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 SERGEFQ9UGK8 458 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 R4GMQ9 66 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 SLC2A10O95528 541 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 MGST1P10620 155 aaKnown RBP17.16■□□□□ 0.34
SMPD3-201ENST00000219334 NME2P22392 152 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 PPT1P50897 306 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 C1orf53Q5VUE5 145 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 PBOV1Q9GZY1 135 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 ETHE1O95571 254 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 CNR1P21554 472 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 FOXB1Q99853 325 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 SARGQ9BW04 601 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 DLL4Q9NR61 685 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 PPM1DO15297 605 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 POU2F2P09086 479 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 MEOX1P50221 254 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 THNSL2Q86YJ6 484 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 OR13F1Q8NGS4 319 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 APOBEC3DQ96AK3 386 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-201ENST00000219334 SIGLEC11Q96RL6 698 aa17.16■□□□□ 0.34
SMPD3-201ENST00000219334 PUS1Q9Y606 427 aaKnown RBP eCLIP17.16■□□□□ 0.34
SMPD3-201ENST00000219334 AQP7O14520 342 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 SULT1C4O75897 302 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 ZNF26P17031 533 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-201ENST00000219334 NXPH1P58417 271 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 SYT6Q5T7P8 510 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-201ENST00000219334 TUBG2Q9NRH3 451 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 GDF2Q9UK05 429 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-201ENST00000219334 ALOX5APP20292 161 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 ERHP84090 104 aaKnown RBP17.15■□□□□ 0.34
SMPD3-201ENST00000219334 TMEM92Q6UXU6 159 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 Q7L0L9 218 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 SYS1Q8N2H4 156 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 FN3KRPQ9HA64 309 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 ZNF225Q9UK10 706 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 PAPPA2Q9BXP8 1791 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 FAM90A27PA6NNH2 459 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 ST8SIA3O43173 380 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 MPPED2Q15777 294 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 ACER2Q5QJU3 275 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 SLC25A26Q70HW3 274 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 UBAC2Q8NBM4 344 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 OR1L3Q8NH93 324 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 UBE2FQ969M7 185 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 ZNF75AQ96N20 296 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 SIAEQ9HAT2 523 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 NRAPQ86VF7 1730 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 A0A0A6YYD5 115 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 TMEM200CA6NKL6 621 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 TRAF3IP2O43734 574 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-201ENST00000219334 RPS2P15880 293 aaKnown RBP17.15■□□□□ 0.34
SMPD3-201ENST00000219334 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-201ENST00000219334 PSMB3P49720 205 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 RNPS1Q15287 305 aaKnown RBP17.15■□□□□ 0.34
SMPD3-201ENST00000219334 SLC30A7Q8NEW0 376 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 BTF3L4Q96K17 158 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 VN1R1Q9GZP7 353 aa17.15■□□□□ 0.34
SMPD3-201ENST00000219334 NDUFB3O43676 98 aa17.14■□□□□ 0.34
SMPD3-201ENST00000219334 LRRC10Q5BKY1 277 aa17.14■□□□□ 0.34
SMPD3-201ENST00000219334 ZNF707Q96C28 371 aaPredicted RBP17.14■□□□□ 0.34
SMPD3-201ENST00000219334 ZNF2Q9BSG1 426 aaPredicted RBP17.14■□□□□ 0.34
SMPD3-201ENST00000219334 ZNF816-ZNF321PA0A0X1KG74 233 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 TERTO14746 1132 aaKnown RBP17.14■□□□□ 0.33
SMPD3-201ENST00000219334 HPNP05981 417 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 GLI3P10071 1580 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 ETV1P50549 477 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 SNTB1Q13884 538 aaKnown RBP17.14■□□□□ 0.33
SMPD3-201ENST00000219334 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.14■□□□□ 0.33
SMPD3-201ENST00000219334 EDARADDQ8WWZ3 215 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 SLC25A37Q9NYZ2 338 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 OR2A25A4D2G3 310 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 SH2D7A6NKC9 451 aaPredicted RBP17.14■□□□□ 0.33
SMPD3-201ENST00000219334 ARPC3O15145 178 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 SPRY3O43610 288 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 CTGFP29279 349 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 TPBGQ13641 420 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 GSG1Q2KHT4 349 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 KIRREL2Q6UWL6 708 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 OR51S1Q8NGJ8 323 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 RELAQ04206 551 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 SLC17A1Q14916 467 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 TAF9Q16594 264 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 ANKRD53Q8N9V6 530 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 OR4D9Q8NGE8 314 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 GPR119Q8TDV5 335 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 SMOC1Q9H4F8 434 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 FLVCR1Q9Y5Y0 555 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 DVL1O14640 695 aa17.14■□□□□ 0.33
SMPD3-201ENST00000219334 CISD3P0C7P0 127 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms