RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 RNF167Q9H6Y7 350 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 CENPMQ9NSP4 180 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 FAM206AQ9NX38 181 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 COL12A1Q99715 3063 aa13.48□□□□□ -0.25
CLN6-219ENST00000637329 TRBV5-5A0A0J9YX44 114 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ACOD1A6NK06 481 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 PYCARD-AS1I3L0S3 204 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 RER1O15258 196 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 CLPXO76031 633 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ISG15P05161 165 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 UCHL1P09936 223 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ABOP16442 354 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 MYL9P24844 172 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 MPGP29372 298 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 OTX1P32242 354 aaPredicted RBP13.47□□□□□ -0.25
CLN6-219ENST00000637329 RPS11P62280 158 aaKnown RBP eCLIP13.47□□□□□ -0.25
CLN6-219ENST00000637329 MFGE8Q08431 387 aaPredicted RBP13.47□□□□□ -0.25
CLN6-219ENST00000637329 KLRB1Q12918 225 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 TAF13Q15543 124 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ACSM3Q53FZ2 586 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ZMAT1Q5H9K5 638 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ELFN2Q5R3F8 820 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 BCL2L15Q5TBC7 163 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ZNF585AQ6P3V2 769 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 PCSK4Q6UW60 755 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 TFAP2EQ6VUC0 442 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ZNF704Q6ZNC4 412 aaPredicted RBP13.47□□□□□ -0.25
CLN6-219ENST00000637329 SPATC1Q76KD6 591 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.47□□□□□ -0.25
CLN6-219ENST00000637329 CD163Q86VB7 1156 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 UBE2J2Q8N2K1 259 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 C9orf106Q8NAJ2 232 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 GPR148Q8TDV2 347 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 HTRA1Q92743 480 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 SLC25A46Q96AG3 418 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 FBXO17Q96EF6 278 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 SLIRPQ9GZT3 109 aaKnown RBP13.47□□□□□ -0.25
CLN6-219ENST00000637329 NUFIP1Q9UHK0 495 aaKnown RBP13.47□□□□□ -0.25
CLN6-219ENST00000637329 FBXL3Q9UKT7 428 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 DNAJC13O75165 2243 aa13.47□□□□□ -0.25
CLN6-219ENST00000637329 TRAV1-2A0A0B4J238 106 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 TMEM269A0A1B0GVZ9 245 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 SGCEO43556 437 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 PNPP00491 289 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 RAF1P04049 648 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 TPOP07202 933 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 ACHEP22303 614 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 CFL1P23528 166 aaKnown RBP13.46□□□□□ -0.25
CLN6-219ENST00000637329 ARF1P84077 181 aaKnown RBP13.46□□□□□ -0.25
CLN6-219ENST00000637329 SLC36A2Q495M3 483 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 Q499Y3 187 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 UNQ9370/PRO34162Q6UXP9 181 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 SLC16A14Q7RTX9 510 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 CEACAM19Q7Z692 300 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 TPRA1Q86W33 373 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 LRRC18Q8N456 261 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 RGP1Q92546 391 aaPredicted RBP13.46□□□□□ -0.25
CLN6-219ENST00000637329 KCNJ15Q99712 375 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 NXF2Q9GZY0 626 aaKnown RBP13.46□□□□□ -0.25
CLN6-219ENST00000637329 TP63Q9H3D4 680 aaPredicted RBP13.46□□□□□ -0.25
CLN6-219ENST00000637329 C12orf49Q9H741 205 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 G6PC2Q9NQR9 355 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 PLEK2Q9NYT0 353 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 OR52A1Q9UKL2 312 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 TIMM10BQ9Y5J6 103 aa13.46□□□□□ -0.25
CLN6-219ENST00000637329 BSNQ9UPA5 3926 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 USP9XQ93008 2570 aaPredicted RBP13.45□□□□□ -0.26
CLN6-219ENST00000637329 CDRT1O95170 752 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 IGHV3-9P01782 118 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 CALRP27797 417 aaKnown RBP13.45□□□□□ -0.26
CLN6-219ENST00000637329 TIMP3P35625 211 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 FAPQ12884 760 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 LY6DQ14210 128 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 ZNF404Q494X3 552 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 CCDC92Q53HC0 331 aaPredicted RBP13.45□□□□□ -0.26
CLN6-219ENST00000637329 TMEM244Q5VVB8 128 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 ANKRD16Q6P6B7 361 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 Q6ZT83 130 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 GCNT2Q8N0V5 402 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 CISD2Q8N5K1 135 aaKnown RBP13.45□□□□□ -0.26
CLN6-219ENST00000637329 OR13C5Q8NGS8 318 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 NANOS1Q8WY41 292 aaKnown RBP13.45□□□□□ -0.26
CLN6-219ENST00000637329 SPTSSAQ969W0 71 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 BOD1Q96IK1 185 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 DERL3Q96Q80 235 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 OR14A2Q96R54 314 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 SH3GL3Q99963 347 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 SLC25A18Q9H1K4 315 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 MMP27Q9H306 513 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 PRSS50Q9UI38 385 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 GTF2A1LQ9UNN4 478 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 FAM215AQ9Y5M1 114 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 ALPK2Q86TB3 2170 aa13.45□□□□□ -0.26
CLN6-219ENST00000637329 A0A075B6Q4 140 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 OR6C6A6NF89 314 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 PRRG2O14669 202 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 CASKO14936 926 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 SYNGR3O43761 229 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 DOK2O60496 412 aa13.44□□□□□ -0.26
CLN6-219ENST00000637329 ITGA5P08648 1049 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms