RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 AKIP1Q9NQ31 210 aa12.06□□□□□ -0.48
TMEM254-213ENST00000613758 A3GALT2U3KPV4 340 aa12.06□□□□□ -0.48
TMEM254-213ENST00000613758 SHISA3A0PJX4 238 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 ABHD16AO95870 558 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 CLEC2LP0C7M8 214 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 PATE4P0C8F1 98 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 PCBD1P61457 104 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 HIST1H3AP68431 136 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 TGFBR3Q03167 851 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 SLC3A1Q07837 685 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 CDK5R1Q15078 307 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 HIST2H3PS2Q5TEC6 136 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 BEND4Q6ZU67 534 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 HIST2H3AQ71DI3 136 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 GABRG1Q8N1C3 465 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 FGFBP3Q8TAT2 258 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 RND1Q92730 232 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 BCL2L2Q92843 193 aaPredicted RBP12.05□□□□□ -0.48
TMEM254-213ENST00000613758 KCTD7Q96MP8 289 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 MMP27Q9H306 513 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF629Q9UEG4 869 aaPredicted RBP12.05□□□□□ -0.48
TMEM254-213ENST00000613758 TIMM10BQ9Y5J6 103 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 SC5DO75845 299 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 RPP14O95059 124 aaKnown RBP12.05□□□□□ -0.48
TMEM254-213ENST00000613758 IL1AP01583 271 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 H2BFMP0C1H6 154 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 BMP5P22003 454 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 PSMB10P40306 273 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 LIPNQ5VXI9 398 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 DEGS2Q6QHC5 323 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 SYT9Q86SS6 491 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.05□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF433Q8N7K0 673 aaPredicted RBP12.05□□□□□ -0.48
TMEM254-213ENST00000613758 WACQ9BTA9 647 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 PIGMQ9H3S5 423 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 GSTK1Q9Y2Q3 226 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 LRP12Q9Y561 859 aa12.05□□□□□ -0.48
TMEM254-213ENST00000613758 CIB4A0PJX0 185 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 CCL21O00585 134 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF254O75437 659 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 RGS9O75916 674 aaPredicted RBP12.04□□□□□ -0.48
TMEM254-213ENST00000613758 LYZL6O75951 148 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 CD1AP06126 327 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF32P17041 273 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 SDC2P34741 201 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 RIDAP52758 137 aaKnown RBP12.04□□□□□ -0.48
TMEM254-213ENST00000613758 P2RY6Q15077 328 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 HIKESHIQ53FT3 197 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 CCDC92Q53HC0 331 aaPredicted RBP12.04□□□□□ -0.48
TMEM254-213ENST00000613758 OR7E24Q6IFN5 339 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 RPL22L1Q6P5R6 122 aaKnown RBP12.04□□□□□ -0.48
TMEM254-213ENST00000613758 SMIM19Q96E16 107 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 MED18Q9BUE0 208 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 PPIL3Q9H2H8 161 aaKnown RBP12.04□□□□□ -0.48
TMEM254-213ENST00000613758 RNF121Q9H920 327 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 PNRC2Q9NPJ4 139 aaKnown RBP12.04□□□□□ -0.48
TMEM254-213ENST00000613758 SNTG1Q9NSN8 517 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 GALNT8Q9NY28 637 aa12.04□□□□□ -0.48
TMEM254-213ENST00000613758 RP1L1Q8IWN7 2480 aaPredicted RBP12.04□□□□□ -0.48
TMEM254-213ENST00000613758 INTS1Q8N201 2190 aaKnown RBP12.04□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF878C9JN71 531 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 MSTNO14793 375 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 BMP4P12644 408 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 COX5AP20674 150 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 TGM4P49221 684 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 NANOS3P60323 173 aaKnown RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 MXD1Q05195 221 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 SCRN3Q0VDG4 424 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 TAF13Q15543 124 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF829Q3KNS6 432 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 SLC36A2Q495M3 483 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 CCDC58Q4VC31 144 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF474Q6S9Z5 364 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 RHOUQ7L0Q8 258 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 LUZP2Q86TE4 346 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 CXorf67Q86X51 503 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 MFSD4AQ8N468 514 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 GHSRQ92847 366 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 SLC25A46Q96AG3 418 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 PLGRKTQ9HBL7 147 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF224Q9NZL3 707 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 SLC5A6Q9Y289 635 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 CACNA1CQ13936 2221 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 SGCEO43556 437 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 RAD51DO75771 328 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 HLA-HP01893 362 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 MMP7P09237 267 aaPredicted RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 SOX6P35712 828 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 GDI2P50395 445 aaKnown RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 RPS11P62280 158 aaKnown RBP eCLIP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 PSG4Q00888 419 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 MRPL28Q13084 256 aaKnown RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 DCTN2Q13561 401 aaKnown RBP12.03□□□□□ -0.48
TMEM254-213ENST00000613758 TRAM1Q15629 374 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 TSC22D1Q15714 1073 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 GABRA6Q16445 453 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 TBRG1Q3YBR2 411 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 ELFN2Q5R3F8 820 aa12.03□□□□□ -0.48
TMEM254-213ENST00000613758 ZNF774Q6NX45 483 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms