RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 COX10Q12887 443 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 ZMAT1Q5H9K5 638 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 C6orf52Q5T4I8 152 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 SLC18B1Q6NT16 456 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 CFAP77Q6ZQR2 320 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 TMEM179BQ7Z7N9 219 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 HS3ST5Q8IZT8 346 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 OR5L1Q8NGL2 311 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 COG8Q96MW5 612 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 DCLRE1CQ96SD1 692 aaKnown RBP13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 POFUT1Q9H488 388 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 PTTG3PQ9NZH4 202 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 ATPIF1Q9UII2 106 aa13.55□□□□□ -0.24
PPFIA4-213ENST00000601609 F5H5K5 113 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 ICMTO60725 284 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 DEAF1O75398 565 aaPredicted RBP13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 PAICSP22234 425 aaKnown RBP13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 COL8A2P25067 703 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 GIFP27352 417 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 FMO3P31513 532 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 GRK5P34947 590 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 LIPAP38571 399 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 RPS27P42677 84 aaKnown RBP13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 CCNIQ14094 377 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 TRIP10Q15642 601 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 ZNF771Q7L3S4 317 aaPredicted RBP13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 YIPF5Q969M3 257 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 CMBLQ96DG6 245 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 ATF6BQ99941 703 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 EGLN1Q9GZT9 426 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 MSL2Q9HCI7 577 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 ZNF275Q9NSD4 429 aaPredicted RBP13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 MRPL22Q9NWU5 206 aaKnown RBP13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 CGGBP1Q9UFW8 167 aaPredicted RBP13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 KCNG2Q9UJ96 466 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 STARD10Q9Y365 291 aa13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 CHD3Q12873 2000 aaKnown RBP13.54□□□□□ -0.24
PPFIA4-213ENST00000601609 ABCA1O95477 2261 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 IGHV1-69-2A0A0G2JMI3 117 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 LOC100289279A0A1B0GTE1 492 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 ZSCAN5BA6NJL1 495 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 IGHV1-46P01743 117 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 ANXA8P13928 327 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 SPI1P17947 270 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 PRKACGP22612 351 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 TUBG1P23258 451 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 SLC6A9P48067 706 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 ECH1Q13011 328 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 PSG7Q13046 419 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 RIN1Q13671 783 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 TAF13Q15543 124 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 SLC27A4Q6P1M0 643 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 LYPD4Q6UWN0 246 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 CD300LDQ6UXZ3 194 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 USP51Q70EK9 711 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 OR5AS1Q8N127 324 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 APOBEC3DQ96AK3 386 aaPredicted RBP13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 ELMOD3Q96FG2 381 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 PLEKHA8Q96JA3 519 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 RBM4Q9BWF3 364 aaKnown RBP13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 TEX12Q9BXU0 123 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 MMADHCQ9H3L0 296 aaPredicted RBP13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 TUBG2Q9NRH3 451 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 CMC2Q9NRP2 79 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 CYB5R1Q9UHQ9 305 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 PURGQ9UJV8 347 aaKnown RBP13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 KCNS2Q9ULS6 477 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 COMMD3-BMI1R4GMX3 469 aa13.53□□□□□ -0.24
PPFIA4-213ENST00000601609 FAM183AA6NL82 134 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 CLUP10909 449 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 OSMP13725 252 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 TNFSF4P23510 183 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 GGT2P36268 569 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 ENTPD1P49961 510 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 MMP15P51511 669 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 SLC25A1P53007 311 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 TPTEP56180 551 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 HIST1H3AP68431 136 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 MRPS11P82912 194 aaKnown RBP13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 GINS1Q14691 196 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 HFEQ30201 348 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 TMEM255AQ5JRV8 349 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 FAM209AQ5JX71 171 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 HIST2H3PS2Q5TEC6 136 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 FAM166AQ6J272 317 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 HIST2H3AQ71DI3 136 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 ZNF511Q8NB15 262 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 PAPD5Q8NDF8 572 aaKnown RBP13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 ZNRF4Q8WWF5 429 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 SPTSSAQ969W0 71 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 SLCO4A1Q96BD0 722 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 COPS4Q9BT78 406 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 MED20Q9H944 212 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 WDR76Q9H967 626 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 NKIRAS2Q9NYR9 191 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 TREM2Q9NZC2 230 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 ZDHHC8Q9ULC8 765 aa13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 FN1P02751 2386 aaKnown RBP13.52□□□□□ -0.25
PPFIA4-213ENST00000601609 CLDN25C9JDP6 229 aa13.51□□□□□ -0.25
PPFIA4-213ENST00000601609 J3QW42 95 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms