RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TBX15Q96SF7 602 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 SLC30A2Q9BRI3 323 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 POLR2J2Q9GZM3 115 aaKnown RBP5.07□□□□□ -1.6
VRK3-220ENST00000600259 POLR2J3Q9H1A7 115 aaKnown RBP5.07□□□□□ -1.6
VRK3-220ENST00000600259 TMBIM4Q9HC24 238 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 TNFRSF19Q9NS68 423 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 A4GNTQ9UNA3 340 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 SH3GLB1Q9Y371 365 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 MED31Q9Y3C7 131 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 RNF114Q9Y508 228 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 POMT1Q9Y6A1 747 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 DNAH3Q8TD57 4116 aa5.07□□□□□ -1.6
VRK3-220ENST00000600259 KMT2CQ8NEZ4 4911 aaKnown RBP5.06□□□□□ -1.6
VRK3-220ENST00000600259 IGHV3-64DA0A0J9YX35 117 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 HTR3EA5X5Y0 456 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 SLC22A31A6NKX4 558 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 IQCF6A8MYZ5 107 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 F5H5P2 479 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 H7C1C5 153 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 J3QW42 95 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 M0QZ24 198 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 FXYD1O00168 92 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 FBP2O00757 339 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 IMPA2O14732 288 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 PHYHO14832 338 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 FFAR1O14842 300 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 TIMM23O14925 209 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 GPR137BO60478 399 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 PTP4A3O75365 173 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 CRYBA1P05813 215 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 NR2C1P13056 603 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 RPS2P15880 293 aaKnown RBP5.06□□□□□ -1.6
VRK3-220ENST00000600259 CTLA4P16410 223 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 CFHR2P36980 270 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 OR1E2P47887 323 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 HTR5AP47898 357 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 PITPNBP48739 271 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 TAS2R41P59536 307 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 RPL15P61313 204 aaKnown RBP5.06□□□□□ -1.6
VRK3-220ENST00000600259 LCN6P62502 163 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 GUCY1A3Q02108 690 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 PRKCDQ05655 676 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 SCRN3Q0VDG4 424 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 TOP3AQ13472 1001 aaPredicted RBP5.06□□□□□ -1.6
VRK3-220ENST00000600259 KCNMB1Q16558 191 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 CYP51A1Q16850 503 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 BEAN1Q3B7T3 259 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 KRTAP27-1Q3LI81 207 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 KPRPQ5T749 579 aaPredicted RBP5.06□□□□□ -1.6
VRK3-220ENST00000600259 NANOGP8Q6NSW7 305 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 Q6ZSV7 163 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 FAM122BQ7Z309 247 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 MOGAT3Q86VF5 341 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 OR5AS1Q8N127 324 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 OR10AD1Q8NGE0 317 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 OR51A7Q8NH64 312 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 OR1F12Q8NHA8 337 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 Q8TCH9 128 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 TSPEARQ8WU66 669 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 STON2Q8WXE9 905 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 DYRK2Q92630 601 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 BPIFA2Q96DR5 249 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 PLEKHA8Q96JA3 519 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 Q96M85 177 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 ZNF583Q96ND8 569 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 SIRPDQ9H106 197 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 C16orf95Q9H693 158 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 NKIRAS1Q9NYS0 192 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 CTSZQ9UBR2 303 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 NDUFAF1Q9Y375 327 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 SNX13Q9Y5W8 968 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 DOCK11Q5JSL3 2073 aa5.06□□□□□ -1.6
VRK3-220ENST00000600259 TRAV27A0A087WT01 109 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 A0A087WUU8 490 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 A0A1W2PPL8 197 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 PRSS37A4D1T9 235 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 A6NIZ1 184 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 ZNF879B4DU55 563 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 P2RY10O00398 339 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 CDC42EP2O14613 210 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 RER1O15258 196 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 AHCYL1O43865 530 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 DOK2O60496 412 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 TSPAN9O75954 239 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 PTBP3O95758 552 aaKnown RBP5.05□□□□□ -1.6
VRK3-220ENST00000600259 IGHV4-59P01825 116 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 HLA-DPB1P04440 258 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 LIPFP07098 398 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 CD14P08571 375 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 IFI30P13284 250 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 CD200P41217 278 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 GUCA1AP43080 201 aaPredicted RBP5.05□□□□□ -1.6
VRK3-220ENST00000600259 IER3P46695 156 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 SRP9P49458 86 aaKnown RBP5.05□□□□□ -1.6
VRK3-220ENST00000600259 RAP1BP61224 184 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 LSM6P62312 80 aaKnown RBP5.05□□□□□ -1.6
VRK3-220ENST00000600259 RAP1AP62834 184 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 GUCA2AQ02747 115 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 ST3GAL3Q11203 375 aa5.05□□□□□ -1.6
VRK3-220ENST00000600259 COX10Q12887 443 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms