RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 ENPP4Q9Y6X5 453 aa8.84□□□□□ -0.99
LSM4-205ENST00000597776 H0YL77 283 aa8.83□□□□□ -1
LSM4-205ENST00000597776 TMPRSS2O15393 492 aa8.83□□□□□ -1
LSM4-205ENST00000597776 KCNAB3O43448 404 aa8.83□□□□□ -1
LSM4-205ENST00000597776 KHDRBS3O75525 346 aaKnown RBP8.83□□□□□ -1
LSM4-205ENST00000597776 NDUFB2O95178 105 aa8.83□□□□□ -1
LSM4-205ENST00000597776 H1F0P07305 194 aaKnown RBP8.83□□□□□ -1
LSM4-205ENST00000597776 IGHV4-38-2P0DP08 117 aa8.83□□□□□ -1
LSM4-205ENST00000597776 RAC2P15153 192 aa8.83□□□□□ -1
LSM4-205ENST00000597776 SELEP16581 610 aa8.83□□□□□ -1
LSM4-205ENST00000597776 TUBG1P23258 451 aa8.83□□□□□ -1
LSM4-205ENST00000597776 PRTN3P24158 256 aa8.83□□□□□ -1
LSM4-205ENST00000597776 SDHAP31040 664 aa8.83□□□□□ -1
LSM4-205ENST00000597776 CD80P33681 288 aa8.83□□□□□ -1
LSM4-205ENST00000597776 CENPAP49450 140 aa8.83□□□□□ -1
LSM4-205ENST00000597776 PRSS12P56730 875 aa8.83□□□□□ -1
LSM4-205ENST00000597776 FXYD6P3P58550 94 aa8.83□□□□□ -1
LSM4-205ENST00000597776 LSM6P62312 80 aaKnown RBP8.83□□□□□ -1
LSM4-205ENST00000597776 BAMBIQ13145 260 aa8.83□□□□□ -1
LSM4-205ENST00000597776 FAM201AQ5SY85 155 aa8.83□□□□□ -1
LSM4-205ENST00000597776 CORO6Q6QEF8 472 aa8.83□□□□□ -1
LSM4-205ENST00000597776 RRM2BQ7LG56 351 aa8.83□□□□□ -1
LSM4-205ENST00000597776 CYP4Z1Q86W10 505 aa8.83□□□□□ -1
LSM4-205ENST00000597776 BHLHE23Q8NDY6 225 aa8.83□□□□□ -1
LSM4-205ENST00000597776 PTP4A1Q93096 173 aa8.83□□□□□ -1
LSM4-205ENST00000597776 FAM162AQ96A26 154 aa8.83□□□□□ -1
LSM4-205ENST00000597776 RSRC1Q96IZ7 334 aaKnown RBP8.83□□□□□ -1
LSM4-205ENST00000597776 MEGF10Q96KG7 1140 aa8.83□□□□□ -1
LSM4-205ENST00000597776 TSSK2Q96PF2 358 aa8.83□□□□□ -1
LSM4-205ENST00000597776 ZNF747Q9BV97 191 aa8.83□□□□□ -1
LSM4-205ENST00000597776 NDEL1Q9GZM8 345 aa8.83□□□□□ -1
LSM4-205ENST00000597776 NUAK2Q9H093 628 aa8.83□□□□□ -1
LSM4-205ENST00000597776 NRIP3Q9NQ35 241 aa8.83□□□□□ -1
LSM4-205ENST00000597776 TUBG2Q9NRH3 451 aa8.83□□□□□ -1
LSM4-205ENST00000597776 ARGLU1Q9NWB6 273 aaPredicted RBP8.83□□□□□ -1
LSM4-205ENST00000597776 VSX1Q9NZR4 365 aaPredicted RBP8.83□□□□□ -1
LSM4-205ENST00000597776 OR5V1Q9UGF6 321 aa8.83□□□□□ -1
LSM4-205ENST00000597776 TMEM5Q9Y2B1 443 aa8.83□□□□□ -1
LSM4-205ENST00000597776 POLR1DQ9Y2S0 133 aa8.83□□□□□ -1
LSM4-205ENST00000597776 AP3M1Q9Y2T2 418 aa8.83□□□□□ -1
LSM4-205ENST00000597776 IER3IP1Q9Y5U9 82 aa8.83□□□□□ -1
LSM4-205ENST00000597776 TRRAPQ9Y4A5 3859 aa8.83□□□□□ -1
LSM4-205ENST00000597776 TRBV4-1A0A0J9YWV2 114 aa8.82□□□□□ -1
LSM4-205ENST00000597776 A0A1W2PRQ8 180 aa8.82□□□□□ -1
LSM4-205ENST00000597776 F5H5P2 479 aa8.82□□□□□ -1
LSM4-205ENST00000597776 DCTN6O00399 190 aa8.82□□□□□ -1
LSM4-205ENST00000597776 SLC22A2O15244 555 aa8.82□□□□□ -1
LSM4-205ENST00000597776 MLNRO43193 412 aa8.82□□□□□ -1
LSM4-205ENST00000597776 PTP4A3O75365 173 aa8.82□□□□□ -1
LSM4-205ENST00000597776 DIRAS1O95057 198 aa8.82□□□□□ -1
LSM4-205ENST00000597776 WNT2P09544 360 aa8.82□□□□□ -1
LSM4-205ENST00000597776 COX4I1P13073 169 aa8.82□□□□□ -1
LSM4-205ENST00000597776 RPS2P15880 293 aaKnown RBP8.82□□□□□ -1
LSM4-205ENST00000597776 CDKN2AP42771 156 aaKnown RBP8.82□□□□□ -1
LSM4-205ENST00000597776 OMPP47874 163 aa8.82□□□□□ -1
LSM4-205ENST00000597776 PAX2Q02962 417 aa8.82□□□□□ -1
LSM4-205ENST00000597776 PAX8Q06710 450 aa8.82□□□□□ -1
LSM4-205ENST00000597776 FOXL1Q12952 345 aa8.82□□□□□ -1
LSM4-205ENST00000597776 DGCR6Q14129 220 aa8.82□□□□□ -1
LSM4-205ENST00000597776 SEC23BQ15437 767 aa8.82□□□□□ -1
LSM4-205ENST00000597776 GPR139Q6DWJ6 353 aa8.82□□□□□ -1
LSM4-205ENST00000597776 C8orf82Q6P1X6 216 aaPredicted RBP8.82□□□□□ -1
LSM4-205ENST00000597776 SHISA2Q6UWI4 295 aa8.82□□□□□ -1
LSM4-205ENST00000597776 FBXW12Q6X9E4 464 aa8.82□□□□□ -1
LSM4-205ENST00000597776 MOGAT3Q86VF5 341 aa8.82□□□□□ -1
LSM4-205ENST00000597776 MUC20Q8N307 709 aaPredicted RBP8.82□□□□□ -1
LSM4-205ENST00000597776 PARP8Q8N3A8 854 aa8.82□□□□□ -1
LSM4-205ENST00000597776 FAM86B1Q8N7N1 296 aa8.82□□□□□ -1
LSM4-205ENST00000597776 OR8G5Q8NG78 346 aa8.82□□□□□ -1
LSM4-205ENST00000597776 RP9Q8TA86 221 aaKnown RBP8.82□□□□□ -1
LSM4-205ENST00000597776 COG8Q96MW5 612 aa8.82□□□□□ -1
LSM4-205ENST00000597776 GPX7Q96SL4 187 aaPredicted RBP8.82□□□□□ -1
LSM4-205ENST00000597776 GPA33Q99795 319 aa8.82□□□□□ -1
LSM4-205ENST00000597776 KCTD14Q9BQ13 255 aaPredicted RBP8.82□□□□□ -1
LSM4-205ENST00000597776 SSBP3Q9BWW4 388 aaPredicted RBP8.82□□□□□ -1
LSM4-205ENST00000597776 MS4A7Q9GZW8 240 aaPredicted RBP8.82□□□□□ -1
LSM4-205ENST00000597776 ANKRD19PQ9H560 264 aa8.82□□□□□ -1
LSM4-205ENST00000597776 TMEM165Q9HC07 324 aa8.82□□□□□ -1
LSM4-205ENST00000597776 NDUFAF4Q9P032 175 aa8.82□□□□□ -1
LSM4-205ENST00000597776 LRCH1Q9Y2L9 728 aa8.82□□□□□ -1
LSM4-205ENST00000597776 LHFPL6Q9Y693 200 aa8.82□□□□□ -1
LSM4-205ENST00000597776 IGLV1-36A0A0B4J1U3 117 aa8.81□□□□□ -1
LSM4-205ENST00000597776 MDFIC2A0A1B0GVS7 189 aa8.81□□□□□ -1
LSM4-205ENST00000597776 PPP1R3DO95685 299 aa8.81□□□□□ -1
LSM4-205ENST00000597776 HLA-DPB1P04440 258 aa8.81□□□□□ -1
LSM4-205ENST00000597776 PMELP40967 661 aa8.81□□□□□ -1
LSM4-205ENST00000597776 SRP9P49458 86 aaKnown RBP8.81□□□□□ -1
LSM4-205ENST00000597776 RGS6P49758 472 aa8.81□□□□□ -1
LSM4-205ENST00000597776 NUDT2P50583 147 aa8.81□□□□□ -1
LSM4-205ENST00000597776 HIST1H3AP68431 136 aa8.81□□□□□ -1
LSM4-205ENST00000597776 HOXA4Q00056 320 aaPredicted RBP8.81□□□□□ -1
LSM4-205ENST00000597776 SLC9A3R2Q15599 337 aa8.81□□□□□ -1
LSM4-205ENST00000597776 KCNMB1Q16558 191 aa8.81□□□□□ -1
LSM4-205ENST00000597776 RSPO1Q2MKA7 263 aaPredicted RBP8.81□□□□□ -1
LSM4-205ENST00000597776 PRR31Q5SQ13 230 aa8.81□□□□□ -1
LSM4-205ENST00000597776 HIST2H3PS2Q5TEC6 136 aa8.81□□□□□ -1
LSM4-205ENST00000597776 SLC27A4Q6P1M0 643 aa8.81□□□□□ -1
LSM4-205ENST00000597776 CFAP77Q6ZQR2 320 aa8.81□□□□□ -1
LSM4-205ENST00000597776 HIST2H3AQ71DI3 136 aa8.81□□□□□ -1
LSM4-205ENST00000597776 ADCK1Q86TW2 530 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms