RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 TSACCQ96A04 125 aaPredicted RBP11.29□□□□□ -0.6
ZNF558-205ENST00000597304 MICU1Q9BPX6 476 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 OR10A5Q9H207 317 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 RAB22AQ9UL26 194 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 LRP12Q9Y561 859 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 A0A0J9YY10 115 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 LOC390937A0A1W2PQ73 354 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 C1orf196B1AJZ1 125 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 RAB27BO00194 218 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 PTAFRP25105 342 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 GDI1P31150 447 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 GPR3P46089 330 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 BIKQ13323 160 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 SMCO1Q147U7 214 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 C1orf100Q5SVJ3 147 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 FNDC7Q5VTL7 733 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 ADAMTS17Q8TE56 1095 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 FAM46BQ96A09 425 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 CMBLQ96DG6 245 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 DNAJA3Q96EY1 480 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 SAT2Q96F10 170 aaPredicted RBP11.29□□□□□ -0.6
ZNF558-205ENST00000597304 SMCO4Q9NRQ5 59 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 MRPL22Q9NWU5 206 aaKnown RBP11.29□□□□□ -0.6
ZNF558-205ENST00000597304 DHCR7Q9UBM7 475 aaKnown RBP11.29□□□□□ -0.6
ZNF558-205ENST00000597304 WIF1Q9Y5W5 379 aa11.29□□□□□ -0.6
ZNF558-205ENST00000597304 KIF26BQ2KJY2 2108 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 WIPF3A6NGB9 483 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 H0YIZ8 118 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 SCDO00767 359 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 SLC16A7O60669 478 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 PLGP00747 810 aaPredicted RBP11.28□□□□□ -0.6
ZNF558-205ENST00000597304 S100A6P06703 90 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 ABCD3P28288 659 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 SLC6A9P48067 706 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 MED25Q71SY5 747 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 MDGA2Q7Z553 956 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 C8orf44Q96CB5 159 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 SEC61A2Q9H9S3 476 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 OR2S2Q9NQN1 319 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 UBQLN4Q9NRR5 601 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 LOC107986453A0A1B0GWG9 222 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 PRSS37A4D1T9 235 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 A6NCN8 305 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 MSGN1A6NI15 193 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 RNASEK-C17orf49H0YIS7 233 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 ZNF264O43296 627 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 MBTPS2O43462 519 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 NOGQ13253 232 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 SQSTM1Q13501 440 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 RBM39Q14498 530 aaKnown RBP11.28□□□□□ -0.6
ZNF558-205ENST00000597304 SGCAQ16586 387 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 DEFB110Q30KQ9 67 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 NUP54Q7Z3B4 507 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 MARCH1Q8TCQ1 289 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 ABHD6Q9BV23 337 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 FN3KRPQ9HA64 309 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 EMC9Q9Y3B6 208 aa11.28□□□□□ -0.6
ZNF558-205ENST00000597304 TRAV20A0A0B4J274 112 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 HCRTR1O43613 425 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 PRKNO60260 465 aaPredicted RBP11.27□□□□□ -0.6
ZNF558-205ENST00000597304 ICOSLGO75144 302 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 TIMP1P01033 207 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 RNH1P13489 461 aaKnown RBP11.27□□□□□ -0.6
ZNF558-205ENST00000597304 TBPP20226 339 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 PAX6P26367 422 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 ELAVL1Q15717 326 aaKnown RBP11.27□□□□□ -0.6
ZNF558-205ENST00000597304 PRSS54Q6PEW0 395 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 RBMS3Q6XE24 437 aaKnown RBP11.27□□□□□ -0.6
ZNF558-205ENST00000597304 SPPL3Q8TCT6 385 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 C14orf79Q96F83 325 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 WDR92Q96MX6 357 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 S1PR5Q9H228 398 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 PRTFDC1Q9NRG1 225 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 GSN-AS1Q9NRJ2 163 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 R4GMQ9 66 aa11.27□□□□□ -0.6
ZNF558-205ENST00000597304 A0A0A6YYC8 382 aaPredicted RBP11.27□□□□□ -0.61
ZNF558-205ENST00000597304 C5orf52A6NGY3 159 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 H0Y8X5 98 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 I3L1I5 382 aaPredicted RBP11.27□□□□□ -0.61
ZNF558-205ENST00000597304 UBE2CO00762 179 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 PMP2P02689 132 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 CBR1P16152 277 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 RUNX3Q13761 415 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 NFATC4Q14934 902 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 POMZP3Q6PJE2 187 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 C12orf76Q8N812 135 aaPredicted RBP11.27□□□□□ -0.61
ZNF558-205ENST00000597304 DTWD2Q8NBA8 298 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 OR52N5Q8NH56 324 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 ROBO4Q8WZ75 1007 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 ZNF524Q96C55 264 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 HRASLS2Q9NWW9 162 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 PCDHGA1Q9Y5H4 931 aa11.27□□□□□ -0.61
ZNF558-205ENST00000597304 K7EQS6 105 aa11.26□□□□□ -0.61
ZNF558-205ENST00000597304 BGLAPP02818 100 aa11.26□□□□□ -0.61
ZNF558-205ENST00000597304 F2RL1P55085 397 aa11.26□□□□□ -0.61
ZNF558-205ENST00000597304 RPL27P61353 136 aaKnown RBP11.26□□□□□ -0.61
ZNF558-205ENST00000597304 ERV3-1Q14264 604 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms