RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 RADILQ96JH8 1075 aa12.96□□□□□ -0.33
DDX49-204ENST00000595858 POM121L2Q96KW2 1035 aa12.96□□□□□ -0.33
DDX49-204ENST00000595858 KCNS3Q9BQ31 491 aa12.96□□□□□ -0.33
DDX49-204ENST00000595858 LOC100509620A0A075B734 347 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 A0A1W2PPW3 197 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 SHISA9B4DS77 424 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 MRPL3P09001 348 aaKnown RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 CCDC159P0C7I6 412 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 COX5BP10606 129 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 CCL2P13500 99 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 ZNF35P13682 527 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 PRF1P14222 555 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 APLNRP35414 380 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 TMED1Q13445 227 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 RAB35Q15286 201 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 ELFN2Q5R3F8 820 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 SLC22A25Q6T423 547 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 ZNF704Q6ZNC4 412 aaPredicted RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 Q6ZNX1 250 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 SPARTQ8N0X7 666 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 SMAP2Q8WU79 429 aaPredicted RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 APH1BQ8WW43 257 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 Q96MT0 163 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 CLEC4MQ9H2X3 399 aaPredicted RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 PNRC2Q9NPJ4 139 aaKnown RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.95□□□□□ -0.34
DDX49-204ENST00000595858 HSPE1-MOB4S4R3N1 261 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 OR6C6A6NF89 314 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 ATP6V1G2-DDX39BF2Z307 99 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 WBP4O75554 376 aaKnown RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 INHBBP09529 407 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 ZNF12P17014 697 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 HTR5AP47898 357 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 GDI2P50395 445 aaKnown RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 HCCSP53701 268 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 EIF2B1Q14232 305 aaKnown RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 TBC1D28Q2M2D7 210 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 TMEM200AQ86VY9 491 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 CDC20BQ86Y33 519 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 PAQR4Q8N4S7 273 aaPredicted RBP12.95□□□□□ -0.34
DDX49-204ENST00000595858 KBTBD8Q8NFY9 601 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 OR51G2Q8NGK0 314 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 OR10S1Q8NGN2 331 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 OR1J2Q8NGS2 313 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 OR1F12Q8NHA8 337 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 OTOSQ8NHW6 89 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 ST7LQ8TDW4 575 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 FBLIM1Q8WUP2 373 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 BCL7BQ9BQE9 202 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 HDHD2Q9H0R4 259 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 ADGRL4Q9HBW9 690 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 PCDHGB1Q9Y5G3 927 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 SNX5Q9Y5X3 404 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 CRYBG3Q68DQ2 2970 aa12.95□□□□□ -0.34
DDX49-204ENST00000595858 C5orf49A4QMS7 147 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 SNTNA6NMZ2 147 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 SBK2P0C263 348 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 CCNOP22674 350 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 MTNR1AP48039 350 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 ZNF454Q8N9F8 522 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 LILRB1Q8NHL6 650 aaPredicted RBP12.94□□□□□ -0.34
DDX49-204ENST00000595858 CNIH3Q8TBE1 160 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 SLC7A6Q92536 515 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 CNN2Q99439 309 aaKnown RBP12.94□□□□□ -0.34
DDX49-204ENST00000595858 ABHD6Q9BV23 337 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 FAIMQ9NVQ4 179 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 ATPIF1Q9UII2 106 aa12.94□□□□□ -0.34
DDX49-204ENST00000595858 ALOX5APP20292 161 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 HGFACQ04756 655 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 POU4F2Q12837 409 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 SMN1Q16637 294 aaKnown RBP12.93□□□□□ -0.34
DDX49-204ENST00000595858 RSPO1Q2MKA7 263 aaPredicted RBP12.93□□□□□ -0.34
DDX49-204ENST00000595858 LINC00299Q6ZSB3 139 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 THEM6Q8WUY1 208 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 NEUROG1Q92886 237 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 SLAMF6Q96DU3 332 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 AMELYQ99218 206 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 COQ7Q99807 217 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 ATF6BQ99941 703 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 NAA50Q9GZZ1 169 aaKnown RBP12.93□□□□□ -0.34
DDX49-204ENST00000595858 CDH20Q9HBT6 801 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 AMBNQ9NP70 447 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 POU2F3Q9UKI9 436 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 APOL3O95236 402 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 ATP6V1E1P36543 226 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 NUDT6P53370 316 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 CXCR4P61073 352 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 ECH1Q13011 328 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 CDK5R2Q13319 367 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 ZNF672Q499Z4 452 aaPredicted RBP12.93□□□□□ -0.34
DDX49-204ENST00000595858 OR4F15Q8NGB8 312 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 AKAP1Q92667 903 aaKnown RBP eCLIP12.93□□□□□ -0.34
DDX49-204ENST00000595858 MUL1Q969V5 352 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 RNFT2Q96EX2 444 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 CENPMQ9NSP4 180 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 DDX28Q9NUL7 540 aaKnown RBP12.93□□□□□ -0.34
DDX49-204ENST00000595858 LAMP5Q9UJQ1 280 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 KLHDC2Q9Y2U9 406 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 ATP23Q9Y6H3 246 aa12.93□□□□□ -0.34
DDX49-204ENST00000595858 DCHS2Q6V1P9 2916 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms