RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 RAF1P04049 648 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 GABRA1P14867 456 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 RAB3BP20337 219 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 SOX2P48431 317 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 CX3CR1P49238 355 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 PER3P56645 1201 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 ECH1Q13011 328 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 RAB35Q15286 201 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 SLC36A2Q495M3 483 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 ACSF3Q4G176 576 aaPredicted RBP13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 RDH10Q8IZV5 341 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 DERL3Q96Q80 235 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 KCNJ15Q99712 375 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 BARHL1Q9BZE3 327 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 PBOV1Q9GZY1 135 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 SMURF1Q9HCE7 757 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 DDX28Q9NUL7 540 aaKnown RBP13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 CKLFQ9UBR5 152 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 TUBD1Q9UJT1 453 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 HHLA2Q9UM44 414 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 N6AMT1Q9Y5N5 214 aa13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 MAP1BP46821 2468 aaKnown RBP13.11□□□□□ -0.31
GTF2F1-202ENST00000593678 TRBV5-5A0A0J9YX44 114 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 DOK2O60496 412 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 TPOP07202 933 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 ANXA2P07355 339 aaKnown RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 FAM87AP0C7U9 286 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 SRMP19623 302 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 ACHEP22303 614 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 PTGER4P35408 488 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 SLC6A9P48067 706 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 ARF1P84077 181 aaKnown RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 ZNF846Q147U1 533 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 FBXW9Q5XUX1 488 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 MZT2AQ6P582 158 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 UNQ9370/PRO34162Q6UXP9 181 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 UNQ6494/PRO21346Q6UXR6 183 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 FAM214BQ7L5A3 538 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 CNEP1R1Q8N9A8 125 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 IL17RDQ8NFM7 739 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 ZCCHC14Q8WYQ9 949 aaKnown RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 RGP1Q92546 391 aaPredicted RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 TMEM106AQ96A25 262 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 FBXO17Q96EF6 278 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 RNF121Q9H920 327 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 SLC24A3Q9HC58 644 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 PNRC2Q9NPJ4 139 aaKnown RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 G6PC2Q9NQR9 355 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 FAM206AQ9NX38 181 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 SVILO95425 2214 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 C1QTNF9BB2RNN3 333 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 F5H5K5 113 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 ZNHIT1O43257 154 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 WDR1O75083 606 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 SRSF10O75494 262 aaKnown RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 ISG15P05161 165 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 C1QTNF9P0C862 333 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 ABOP16442 354 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 OR3A2P47893 321 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 HIST1H3AP68431 136 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 DCTN2Q13561 401 aaKnown RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 SPANXN2Q5MJ10 180 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 DDI2Q5TDH0 399 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 HIST2H3PS2Q5TEC6 136 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 NSUN5P2Q63ZY6 315 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 HIST2H3AQ71DI3 136 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 GCNT2Q8N0V5 402 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 OR13C3Q8NGS6 347 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 PPIL3Q9H2H8 161 aaKnown RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 MALT1Q9UDY8 824 aa13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 NUFIP1Q9UHK0 495 aaKnown RBP13.1□□□□□ -0.31
GTF2F1-202ENST00000593678 LOC107986453A0A1B0GWG9 222 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 SHISA3A0PJX4 238 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 H3BSH0 61 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 NCR1O76036 304 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 WISP2O76076 250 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 ZNF32P17041 273 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 CAV3P56539 151 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 ZNF121P58317 390 aaPredicted RBP13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 TGFBR3Q03167 851 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 CCDC92Q53HC0 331 aaPredicted RBP13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 IDNKQ5T6J7 187 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 FGD2Q7Z6J4 655 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 ELMOD2Q8IZ81 293 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 BORCS5Q969J3 196 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 PLGRKTQ9HBL7 147 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 PLEKHB1Q9UF11 243 aaPredicted RBP13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 CMAHPQ9Y471 501 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 NCOR2Q9Y618 2525 aa13.09□□□□□ -0.31
GTF2F1-202ENST00000593678 A0A1B0GVI7 797 aa13.08□□□□□ -0.32
GTF2F1-202ENST00000593678 SYT7O43581 403 aa13.08□□□□□ -0.32
GTF2F1-202ENST00000593678 CTSSP25774 331 aa13.08□□□□□ -0.32
GTF2F1-202ENST00000593678 MPGP29372 298 aa13.08□□□□□ -0.32
GTF2F1-202ENST00000593678 TPTEP56180 551 aa13.08□□□□□ -0.32
GTF2F1-202ENST00000593678 EIF2S3LQ2VIR3 472 aaKnown RBP13.08□□□□□ -0.32
GTF2F1-202ENST00000593678 SFXN4Q6P4A7 337 aa13.08□□□□□ -0.32
GTF2F1-202ENST00000593678 SKA3Q8IX90 412 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms