RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 RFPL4BQ6ZWI9 263 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 OR1J1Q8NGS3 322 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 OTOSQ8NHW6 89 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 ABHD4Q8TB40 342 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 CYGBQ8WWM9 190 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 IPCEF1Q8WWN9 437 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 IGFBPL1Q8WX77 278 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 RFKQ969G6 155 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 MBD6Q96DN6 1003 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 ZNF582Q96NG8 517 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 DCLRE1CQ96SD1 692 aaKnown RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 CNN2Q99439 309 aaKnown RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 APOL4Q9BPW4 351 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 COPS4Q9BT78 406 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 ABHD6Q9BV23 337 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 YIPF3Q9GZM5 350 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 CENPMQ9NSP4 180 aa12.86□□□□□ -0.35
DDX39A-221ENST00000593026 DDX28Q9NUL7 540 aaKnown RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 WARS2Q9UGM6 360 aaKnown RBP12.86□□□□□ -0.35
DDX39A-221ENST00000593026 PDZD2O15018 2839 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 MPZL2O60487 215 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 NGFP01138 241 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 LYNP07948 512 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 NUDT6P53370 316 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 ERVS71-1P61550 626 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 SNRPD2P62316 118 aaKnown RBP12.85□□□□□ -0.35
DDX39A-221ENST00000593026 RIPK1Q13546 671 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 TAF13Q15543 124 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 EFNB3Q15768 340 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 MEDAGQ5VYS4 303 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 TTC23Q5W5X9 447 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 C11orf71Q6IPW1 123 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 C1orf174Q8IYL3 243 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 ENTHD1Q8IYW4 607 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 DHRSXQ8N5I4 330 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 SPTSSAQ969W0 71 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 MRPL24Q96A35 216 aaKnown RBP12.85□□□□□ -0.35
DDX39A-221ENST00000593026 MRPL37Q9BZE1 423 aaKnown RBP12.85□□□□□ -0.35
DDX39A-221ENST00000593026 PLK3Q9H4B4 646 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 TBCCD1Q9NVR7 557 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 HAO2Q9NYQ3 351 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 LAMP5Q9UJQ1 280 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 FZR1Q9UM11 496 aa12.85□□□□□ -0.35
DDX39A-221ENST00000593026 CSMD2Q7Z408 3487 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 B9A039 149 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 F5H5K5 113 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 J3QW42 95 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 ENTPD6O75354 484 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 ACSM4P0C7M7 580 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 BMP4P12644 408 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 CDKN1AP38936 164 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 SLC15A1P46059 708 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 TPTEP56180 551 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 PPP1CBP62140 327 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 GRB2P62993 217 aaKnown RBP12.84□□□□□ -0.35
DDX39A-221ENST00000593026 POU4F2Q12837 409 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 TMED1Q13445 227 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 OCLNQ16625 522 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 MSMPQ1L6U9 139 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 SWI5Q1ZZU3 235 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 RSPO1Q2MKA7 263 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-221ENST00000593026 MST1LQ2TV78 715 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 KRTAP27-1Q3LI81 207 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 SLC25A30Q5SVS4 291 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 SPATA46Q5T0L3 261 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 LURAP1LQ8IV03 231 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 OR51G2Q8NGK0 314 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 THEM6Q8WUY1 208 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 RNF133Q8WVZ7 376 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 NRG4Q8WWG1 115 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 APOBEC3DQ96AK3 386 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-221ENST00000593026 COG8Q96MW5 612 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 AMELYQ99218 206 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 SYT3Q9BQG1 590 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 CACNG6Q9BXT2 260 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 ADGRL4Q9HBW9 690 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 DUSP13Q9UII6 198 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
DDX39A-221ENST00000593026 RRP15Q9Y3B9 282 aaKnown RBP12.84□□□□□ -0.35
DDX39A-221ENST00000593026 TMEM14AQ9Y6G1 99 aa12.84□□□□□ -0.35
DDX39A-221ENST00000593026 SNTNA6NMZ2 147 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 M0R135 149 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 OVOL3O00110 214 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 ATP6V1G2O95670 118 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 ZNF250P15622 560 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 GABRB1P18505 474 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 ALOX5APP20292 161 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 HSD11B1P28845 292 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 GCH1P30793 250 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 OTX1P32242 354 aaPredicted RBP12.83□□□□□ -0.36
DDX39A-221ENST00000593026 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 SLC6A9P48067 706 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 EVX1P49640 407 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 HCCSP53701 268 aa12.83□□□□□ -0.36
DDX39A-221ENST00000593026 KLF3P57682 345 aaPredicted RBP12.83□□□□□ -0.36
DDX39A-221ENST00000593026 SELENOVP59797 346 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms